D. rerio Gene: fut9d - ENSDARG00000028098 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000028098
Namefut9d
Descriptionfucosyltransferase 9d [Source:ZFIN;Acc:ZDB-GENE-050309-15]
OrganismDanio rerio (zebrafish)
Synonym(s)im:6895158, zgc:162337, zgc:171333
Orthologs(s)1 orthologs
Paralog(s)9 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.87e3
  • 1.87e3
  • 3.40e3
93.75
  • 93.75
  • 88.63
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
2.38e3
  • 2.38e3
  • 2.41e3
  • 4.70e3
  • 4.89e3
  • 5.76e3
92.05
  • 92.05
  • 91.93
  • 84.27
  • 83.62
  • 80.71
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
2.70e3
  • 2.70e3
90.97
  • 90.97
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
5.76e3
  • 5.76e3
  • 6.84e3
80.73
  • 80.73
  • 77.10
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
6.78e3
  • 6.78e3
  • 1.98e4
77.30
  • 77.30
  • 33.78
AEIR
  • AEIR
  • AEIR
UBERON:0001003skin epidermis
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
9.67e3
  • 9.67e3
  • 1.05e4
  • 1.14e4
  • 1.21e4
67.63
  • 67.63
  • 64.69
  • 61.75
  • 59.36
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
1.12e4
  • 1.12e4
62.40
  • 62.40
AEIR
  • AEIR
UBERON:0003055periderm
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
1.14e4
  • 1.14e4
  • 1.20e4
  • 1.20e4
61.75
  • 61.75
  • 59.98
  • 59.98
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
61.45
  • 61.45
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
1.33e4
  • 1.33e4
55.34
  • 55.34
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.69e4
  • 1.69e4
43.55
  • 43.55
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.45e4
  • 2.45e4
17.88
  • 17.88
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Bilateria1 species1 geneCompare expression

Orthology information comes from OMA : ENSDARG00000028098.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Otophysi5 genesCompare expression
Clupeocephala6 genesCompare expression
Bilateria7 genesCompare expression
Opisthokonta9 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000028098.

Cross-references

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