D. rerio Gene: sumo3a - ENSDARG00000028119 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000028119
Namesumo3a
Descriptionsmall ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
OrganismDanio rerio (zebrafish)
Synonym(s)fa94a11, im:7141764, sumo2, sumo3, sumo3l, wu:fa94a11, wu:fb55d09, zgc:65847, zgc:85643

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
82.0
  • 82.0
99.73
  • 99.73
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
116
  • 116
99.61
  • 99.61
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
143
  • 143
  • 263
  • 307
  • 364
  • 406
  • 461
99.52
  • 99.52
  • 99.12
  • 98.98
  • 98.78
  • 98.64
  • 98.46
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
151
  • 151
  • 151
  • 529
  • 645
  • 1.36e3
99.50
  • 99.50
  • 99.50
  • 98.23
  • 97.84
  • 95.46
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
229
  • 229
99.24
  • 99.24
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000068embryo stage
  • ZFS:0000013Blastula:Oblong
  • UBERON:0000066fully formed stage
  • ZFS:0000049segmentation
  • UBERON:0000104life cycle
299
  • 299
  • 318
  • 326
  • 341
  • 380
  • 384
  • 446
  • 551
  • 572
  • 612
  • 880
  • 1.05e3
  • 1.07e3
  • 1.13e3
  • 5.20e3
  • 6.79e3
  • 1.25e4
  • 1.31e4
  • 1.50e4
99.00
  • 99.00
  • 98.94
  • 98.91
  • 98.86
  • 98.73
  • 98.72
  • 98.51
  • 98.16
  • 98.09
  • 97.96
  • 97.06
  • 96.47
  • 96.42
  • 96.22
  • 82.59
  • 77.27
  • 58.10
  • 56.21
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
329
  • 329
  • 1.44e4
98.90
  • 98.90
  • 51.84
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
362
  • 362
  • 379
  • 383
  • 384
  • 626
  • 638
  • 692
  • 723
  • 726
  • 1.87e3
98.79
  • 98.79
  • 98.73
  • 98.72
  • 98.72
  • 97.91
  • 97.87
  • 97.69
  • 97.58
  • 97.57
  • 93.76
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
398
  • 398
  • 1.21e3
98.67
  • 98.67
  • 95.96
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
433
  • 433
  • 1.01e3
  • 1.03e3
  • 4.02e3
98.55
  • 98.55
  • 96.63
  • 96.56
  • 86.54
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
519
  • 519
98.26
  • 98.26
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
525
  • 525
98.25
  • 98.25
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
595
  • 595
  • 1.79e3
  • 1.21e4
98.01
  • 98.01
  • 94.00
  • 59.59
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000104life cycle
  • ZFS:0000029Pharyngula:Prim-5
687
  • 687
  • 743
  • 1.22e4
  • 1.29e4
  • 1.34e4
97.70
  • 97.70
  • 97.51
  • 59.08
  • 56.90
  • 54.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
699
  • 699
97.66
  • 97.66
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
706
  • 706
97.64
  • 97.64
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
774
  • 774
97.41
  • 97.41
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
856
  • 856
  • 899
  • 1.21e3
97.14
  • 97.14
  • 96.99
  • 95.94
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
867
  • 867
97.10
  • 97.10
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
946
  • 946
96.84
  • 96.84
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.15e3
  • 1.15e3
96.16
  • 96.16
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.15e3
  • 1.15e3
96.14
  • 96.14
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.20e3
  • 1.20e3
  • 2.28e3
96.00
  • 96.00
  • 92.37
AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.41e3
  • 1.41e3
95.29
  • 95.29
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.45e3
  • 1.45e3
95.15
  • 95.15
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.47e3
  • 1.47e3
95.08
  • 95.08
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.52e3
  • 1.52e3
94.93
  • 94.93
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
1.59e3
  • 1.59e3
94.66
  • 94.66
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.63e3
  • 1.63e3
94.55
  • 94.55
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.79e3
  • 1.79e3
94.02
  • 94.02
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
2.03e3
  • 2.03e3
93.21
  • 93.21
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.09e3
  • 2.09e3
92.99
  • 92.99
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • UBERON:0000106zygote stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
2.13e3
  • 2.13e3
  • 2.13e3
  • 2.13e3
  • 2.49e3
  • 2.49e3
  • 2.49e3
  • 2.49e3
  • 2.49e3
  • 2.49e3
  • 2.49e3
  • 2.49e3
  • 2.49e3
  • 2.49e3
  • 2.49e3
  • 2.49e3
  • 3.32e3
  • 3.45e3
  • 4.27e3
  • 4.98e3
  • 4.98e3
  • 4.98e3
  • 6.15e3
  • 6.15e3
  • 6.40e3
  • 6.64e3
  • 6.64e3
  • 6.64e3
  • 6.64e3
  • 6.72e3
  • 6.72e3
  • 6.97e3
92.86
  • 92.86
  • 92.86
  • 92.86
  • 91.67
  • 91.67
  • 91.67
  • 91.67
  • 91.67
  • 91.67
  • 91.67
  • 91.67
  • 91.67
  • 91.67
  • 91.67
  • 91.67
  • 88.89
  • 88.46
  • 85.71
  • 83.33
  • 83.33
  • 83.33
  • 79.40
  • 79.40
  • 78.56
  • 77.77
  • 77.77
  • 77.77
  • 77.77
  • 77.49
  • 77.49
  • 76.66
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
2.79e3
  • 2.79e3
90.67
  • 90.67
AEIR
  • AEIR
UBERON:0005419pectoral appendage bud
  • ZFS:0000033Hatching:Long-pec
9.96e3
  • 9.96e3
66.66
  • 66.66
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
  • 1.24e4
  • 1.29e4
  • 1.42e4
65.06
  • 65.06
  • 58.33
  • 56.65
  • 52.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001846internal ear
  • UBERON:0000068embryo stage
1.14e4
  • 1.14e4
61.97
  • 61.97
AEIR
  • AEIR
UBERON:0002342neural crest
  • ZFS:0000029Pharyngula:Prim-5
1.31e4
  • 1.31e4
56.24
  • 56.24
AEIR
  • AEIR
UBERON:0001997olfactory epithelium
  • UBERON:0000104life cycle
1.36e4
  • 1.36e4
54.59
  • 54.59
AEIR
  • AEIR
UBERON:0008896post-hyoid pharyngeal arch
  • ZFS:0000035Larval:Protruding-mouth
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0011150pharyngeal arch derived gill
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
49.98
  • 49.98
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBC058303, BC068341
EnsemblENSDARG00000028119 (sumo3a)
Uniprot/SWISSPROTQ6NV25, SMO3L_DANRE
ZFINZDB-GENE-040426-2133 (sumo3a)

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