D. rerio Gene: slc4a2a - ENSDARG00000028173 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000028173
Nameslc4a2a
Descriptionsolute carrier family 4 (anion exchanger), member 2a [Source:ZFIN;Acc:ZDB-GENE-051101-2]
OrganismDanio rerio (zebrafish)
Synonym(s)ae2, ae2.1, slc4a2

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
936
  • 936
96.87
  • 96.87
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.17e3
  • 1.17e3
96.10
  • 96.10
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.19e3
  • 1.19e3
96.03
  • 96.03
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
2.01e3
  • 2.01e3
  • 7.82e3
93.28
  • 93.28
  • 73.82
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0004707pharyngula stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000037Larval:Day 5
4.31e3
  • 4.31e3
  • 6.71e3
  • 7.12e3
  • 7.20e3
  • 7.23e3
  • 8.29e3
  • 9.19e3
  • 9.82e3
  • 1.01e4
  • 1.42e4
85.56
  • 85.56
  • 77.53
  • 76.16
  • 75.90
  • 75.81
  • 72.24
  • 69.23
  • 67.13
  • 66.03
  • 52.54
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000106zygote stage
4.52e3
  • 4.52e3
  • 5.71e3
  • 7.40e3
  • 8.01e3
  • 8.29e3
  • 8.72e3
  • 9.13e3
  • 9.30e3
  • 9.41e3
  • 9.52e3
  • 9.67e3
  • 1.02e4
  • 1.03e4
  • 1.09e4
  • 1.13e4
84.87
  • 84.87
  • 80.87
  • 75.22
  • 73.17
  • 72.24
  • 70.81
  • 69.43
  • 68.88
  • 68.49
  • 68.12
  • 67.62
  • 65.77
  • 65.61
  • 63.43
  • 62.06
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.66e3
  • 4.66e3
84.40
  • 84.40
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
4.94e3
  • 4.94e3
83.46
  • 83.46
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
6.06e3
  • 6.06e3
  • 9.99e3
  • 1.18e4
  • 1.19e4
79.73
  • 79.73
  • 66.56
  • 60.35
  • 60.07
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
6.39e3
  • 6.39e3
78.62
  • 78.62
AEIR
  • AEIR
UBERON:0009622pronephric proximal straight tubule
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
6.40e3
  • 6.40e3
  • 7.47e3
78.57
  • 78.57
  • 75.00
AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
6.89e3
  • 6.89e3
  • 8.54e3
  • 8.79e3
  • 8.96e3
  • 9.13e3
  • 9.13e3
76.92
  • 76.92
  • 71.41
  • 70.57
  • 69.98
  • 69.43
  • 69.43
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007298pronephric proximal convoluted tubule
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
7.47e3
  • 7.47e3
  • 8.96e3
75.00
  • 75.00
  • 70.00
AEIR
  • AEIR
  • AEIR
UBERON:0003060pronephric duct
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000025Segmentation:10-13 somites
7.47e3
  • 7.47e3
  • 7.91e3
  • 8.96e3
  • 9.34e3
  • 9.34e3
  • 1.03e4
  • 1.08e4
  • 1.20e4
  • 1.26e4
  • 1.49e4
  • 1.49e4
74.99
  • 74.99
  • 73.52
  • 70.00
  • 68.74
  • 68.74
  • 65.61
  • 63.87
  • 59.98
  • 57.87
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
7.96e3
  • 7.96e3
73.34
  • 73.34
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
8.14e3
  • 8.14e3
72.76
  • 72.76
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
8.50e3
  • 8.50e3
  • 9.67e3
  • 1.28e4
71.52
  • 71.52
  • 67.62
  • 57.19
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
9.05e3
  • 9.05e3
69.69
  • 69.69
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
9.74e3
  • 9.74e3
67.39
  • 67.39
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.03e4
  • 1.03e4
65.41
  • 65.41
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.04e4
  • 1.04e4
65.30
  • 65.30
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
  • 1.28e4
64.89
  • 64.89
  • 56.98
AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
  • 1.16e4
64.57
  • 64.57
  • 61.07
AEIR
  • AEIR
  • AEIR
UBERON:0007308pronephric distal early tubule
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
1.12e4
  • 1.12e4
  • 1.19e4
62.50
  • 62.50
  • 60.00
AEIR
  • AEIR
  • AEIR
ZFA:0001624pronephric distal late tubule (Danio)
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
1.12e4
  • 1.12e4
  • 1.19e4
62.50
  • 62.50
  • 60.00
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.14e4
  • 1.14e4
61.92
  • 61.92
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
1.15e4
  • 1.15e4
  • 1.15e4
  • 1.27e4
  • 1.30e4
  • 1.32e4
  • 1.39e4
61.56
  • 61.56
  • 61.35
  • 57.51
  • 56.59
  • 55.69
  • 53.54
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.24e4
  • 1.24e4
58.42
  • 58.42
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.24e4
  • 1.24e4
58.37
  • 58.37
AEIR
  • AEIR
UBERON:2007032midbrain neural rod
  • ZFS:0000024Segmentation:5-9 somites
1.28e4
  • 1.28e4
57.14
  • 57.14
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
56.02
  • 56.02
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
1.34e4
  • 1.34e4
  • 1.52e4
  • 1.66e4
55.16
  • 55.16
  • 49.17
  • 44.52
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001945superior colliculus
  • ZFS:0000029Pharyngula:Prim-5
1.35e4
  • 1.35e4
54.73
  • 54.73
AEIR
  • AEIR
UBERON:0010312immature eye
  • ZFS:0000029Pharyngula:Prim-5
1.35e4
  • 1.35e4
54.73
  • 54.73
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
50.26
  • 50.26
AEIR
  • AEIR
UBERON:2002225posterior pronephric duct
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 49.99
AEIR
  • AEIR
  • AEIR
UBERON:2001073axial vasculature
  • ZFS:0000029Pharyngula:Prim-5
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.55e4
  • 1.55e4
48.21
  • 48.21
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.71e4
  • 1.71e4
42.81
  • 42.81
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.82e4
  • 1.82e4
38.92
  • 38.92
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

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