D. rerio Gene: si:ch211-196h16.12 - ENSDARG00000028276 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000028276
Namesi:ch211-196h16.12
Descriptionsi:ch211-196h16.12 [Source:ZFIN;Acc:ZDB-GENE-121214-351]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
280
  • 280
99.07
  • 99.07
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
5.83e3
  • 5.83e3
  • 1.64e4
80.47
  • 80.47
  • 45.14
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
9.10e3
  • 9.10e3
69.53
  • 69.53
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
9.87e3
  • 9.87e3
  • 1.91e4
66.96
  • 66.96
  • 36.18
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
1.30e4
  • 1.30e4
56.37
  • 56.37
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.32e4
  • 1.32e4
  • 1.40e4
55.89
  • 55.89
  • 53.17
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.59e4
  • 1.59e4
46.80
  • 46.80
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.63e4
  • 1.63e4
45.47
  • 45.47
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.64e4
  • 1.64e4
45.17
  • 45.17
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
1.64e4
  • 1.64e4
  • 1.99e4
  • 2.13e4
  • 2.18e4
  • 2.25e4
45.09
  • 45.09
  • 33.47
  • 28.57
  • 26.95
  • 24.74
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.72e4
  • 1.72e4
  • 1.90e4
42.27
  • 42.27
  • 36.29
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.74
  • 40.74
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.88e4
  • 1.88e4
36.91
  • 36.91
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.90e4
  • 1.90e4
36.34
  • 36.34
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.08e4
  • 2.08e4
30.32
  • 30.32
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.15e4
  • 2.15e4
27.93
  • 27.93
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAL929150
EnsemblENSDARG00000028276 (si:ch211-196h16.12)
Uniprot/SPTREMBLE7F7I7, E7F7I7_DANRE
ZFINZDB-GENE-121214-351 (si:ch211-196h16.12)

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