D. rerio Gene: si:ch211-121a2.4 - ENSDARG00000028541 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000028541
Namesi:ch211-121a2.4
Descriptionsi:ch211-121a2.4 [Source:ZFIN;Acc:ZDB-GENE-070705-23]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
9.54e3
  • 9.54e3
68.06
  • 68.06
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.32
  • 63.32
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
1.15e4
  • 1.15e4
  • 1.23e4
61.48
  • 61.48
  • 58.95
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.18e4
  • 1.18e4
  • 1.20e4
60.51
  • 60.51
  • 59.79
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.28e4
  • 1.28e4
  • 1.59e4
57.15
  • 57.15
  • 46.69
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.33e4
  • 1.33e4
55.55
  • 55.55
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.37e4
  • 1.37e4
54.24
  • 54.24
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
53.55
  • 53.55
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.48e4
  • 1.48e4
  • 1.56e4
  • 1.72e4
  • 1.85e4
  • 1.86e4
50.56
  • 50.56
  • 47.75
  • 42.54
  • 38.12
  • 37.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.58e4
  • 1.58e4
  • 2.11e4
46.99
  • 46.99
  • 29.21
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.61e4
  • 1.61e4
45.99
  • 45.99
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.68e4
  • 1.68e4
43.85
  • 43.85
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.69e4
  • 1.69e4
43.58
  • 43.58
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.69e4
  • 1.69e4
43.57
  • 43.57
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.75e4
  • 1.75e4
41.31
  • 41.31
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.76e4
  • 1.76e4
41.19
  • 41.19
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.78e4
  • 1.78e4
  • 1.99e4
40.52
  • 40.52
  • 33.48
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.02e4
  • 2.02e4
32.44
  • 32.44
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.20e4
  • 2.20e4
26.19
  • 26.19
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLBX511260
EnsemblENSDARG00000028541 (si:ch211-121a2.4)
Uniprot/SPTREMBLE7EXU5, E7EXU5_DANRE, F1R7W9, F1R7W9_DANRE
ZFINZDB-GENE-070705-23 (si:ch211-121a2.4)

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