D. rerio Gene: gdap1l1 - ENSDARG00000028628 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000028628
Namegdap1l1
Descriptionganglioside induced differentiation associated protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-080812-2]
OrganismDanio rerio (zebrafish)
Orthologs(s)22 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
4.04e3
  • 4.04e3
86.47
  • 86.47
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
5.47e3
  • 5.47e3
81.69
  • 81.69
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
6.72e3
  • 6.72e3
  • 1.21e4
77.50
  • 77.50
  • 59.56
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
8.93e3
  • 8.93e3
  • 9.23e3
  • 1.50e4
  • 1.52e4
  • 1.52e4
70.10
  • 70.10
  • 69.11
  • 49.76
  • 49.22
  • 49.02
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.02e4
  • 1.02e4
65.84
  • 65.84
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.05e4
  • 1.05e4
  • 1.22e4
64.78
  • 64.78
  • 59.27
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
60.64
  • 60.64
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.47e4
  • 1.47e4
  • 1.70e4
50.68
  • 50.68
  • 42.92
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.55e4
  • 1.55e4
48.14
  • 48.14
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.59e4
  • 1.59e4
46.84
  • 46.84
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.59e4
  • 1.59e4
46.74
  • 46.74
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.59e4
  • 1.59e4
46.62
  • 46.62
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.60e4
  • 1.60e4
46.31
  • 46.31
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.62e4
  • 1.62e4
45.92
  • 45.92
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
1.62e4
  • 1.62e4
  • 1.64e4
45.73
  • 45.73
  • 45.15
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.65e4
  • 1.65e4
44.59
  • 44.59
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.67e4
  • 1.67e4
44.12
  • 44.12
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.81e4
  • 1.81e4
39.50
  • 39.50
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.83e4
  • 1.83e4
38.79
  • 38.79
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.84e4
  • 1.84e4
38.33
  • 38.33
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.20e4
  • 2.20e4
26.18
  • 26.18
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi16 species16 genesCompare expression
Bilateria22 species22 genesCompare expression

Orthology information comes from OMA : ENSDARG00000028628.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Bilateria1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000028628.

Cross-references

EnsemblENSDARG00000028628 (gdap1l1)
ZFINZDB-GENE-080812-2 (gdap1l1)
EMBLBX465853
Uniprot/SPTREMBLB8A514, B8A514_DANRE

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