D. rerio Gene: CYTH2 - ENSDARG00000028800 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000028800
NameCYTH2
Descriptionsi:dkey-283b15.4 [Source:ZFIN;Acc:ZDB-GENE-100921-55]
OrganismDanio rerio (zebrafish)
Synonym(s)arno, cts18.1, cyth2, cytohesin-2, pscd2, pscd2l, sec7p-l, sec7p-like
Orthologs(s)22 orthologs
Paralog(s)6 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
3.14e3
  • 3.14e3
89.49
  • 89.49
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
3.75e3
  • 3.75e3
  • 7.85e3
  • 9.44e3
  • 1.07e4
  • 1.16e4
87.46
  • 87.46
  • 73.73
  • 68.39
  • 64.14
  • 61.30
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
3.84e3
  • 3.84e3
  • 4.42e3
87.15
  • 87.15
  • 85.20
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
5.72e3
  • 5.72e3
  • 6.90e3
80.86
  • 80.86
  • 76.91
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
5.84e3
  • 5.84e3
80.46
  • 80.46
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
7.42e3
  • 7.42e3
75.17
  • 75.17
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
7.75e3
  • 7.75e3
74.05
  • 74.05
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
8.31e3
  • 8.31e3
72.18
  • 72.18
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
8.69e3
  • 8.69e3
  • 9.36e3
70.90
  • 70.90
  • 68.68
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
9.59e3
  • 9.59e3
  • 1.15e4
67.91
  • 67.91
  • 61.33
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.84
  • 63.84
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.80
  • 63.80
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.16
  • 63.16
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
62.99
  • 62.99
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.77
  • 60.77
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.18e4
  • 1.18e4
60.45
  • 60.45
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
  • 1.52e4
60.45
  • 60.45
  • 49.21
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
59.76
  • 59.76
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.36e4
  • 1.36e4
54.60
  • 54.60
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.36e4
  • 1.36e4
54.53
  • 54.53
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.37e4
  • 1.37e4
54.22
  • 54.22
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.38e4
  • 1.38e4
53.67
  • 53.67
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.43e4
  • 1.43e4
52.24
  • 52.24
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.46e4
  • 1.46e4
50.99
  • 50.99
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
50.43
  • 50.43
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.87e4
  • 1.87e4
37.25
  • 37.25
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi16 species16 genesCompare expression
Bilateria22 species22 genesCompare expression

Orthology information comes from OMA : ENSDARG00000028800.

Paralogs (same species)

Paralogy information comes from OMA : ENSDARG00000028800.

Cross-references

EnsemblENSDARG00000028800 (CYTH2)
HGNCHGNC:9502 (CYTH2)
ZFINZDB-GENE-100921-55 (si:dkey-283b15.4)
EMBLCR848788
Uniprot/SPTREMBLE7F1N2, E7F1N2_DANRE

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