D. rerio Gene: SGSM1 (1 to many) - ENSDARG00000028857 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000028857
NameSGSM1 (1 to many)
Descriptionsmall G protein signaling modulator 1 [Source:HGNC Symbol;Acc:HGNC:29410]
OrganismDanio rerio (zebrafish)
Synonym(s)kiaa1941, rutbc2, sgsm1, si:rp71-1c23.1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.02e4
  • 1.02e4
  • 1.06e4
65.80
  • 65.80
  • 64.61
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.13e4
  • 1.13e4
62.11
  • 62.11
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.30
  • 60.30
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
1.24e4
  • 1.24e4
58.53
  • 58.53
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.44e4
  • 1.44e4
51.64
  • 51.64
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
1.55e4
  • 1.55e4
  • 1.99e4
  • 2.17e4
  • 2.35e4
48.16
  • 48.16
  • 33.23
  • 27.38
  • 21.33
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.65e4
  • 1.65e4
44.91
  • 44.91
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.72e4
  • 1.72e4
42.46
  • 42.46
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.82e4
  • 1.82e4
  • 2.01e4
39.16
  • 39.16
  • 32.84
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.88e4
  • 1.88e4
37.20
  • 37.20
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.88e4
  • 1.88e4
37.07
  • 37.07
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.99e4
  • 1.99e4
33.37
  • 33.37
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.07e4
  • 2.07e4
30.83
  • 30.83
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.09e4
  • 2.09e4
30.09
  • 30.09
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.13e4
  • 2.13e4
28.73
  • 28.73
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.15e4
  • 2.15e4
28.12
  • 28.12
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
2.28e4
  • 2.28e4
  • 2.28e4
23.79
  • 23.79
  • 23.56
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSDARG00000028857 (SGSM1 (1 to many))
HGNCHGNC:29410 (SGSM1 (1 to many))
Uniprot/SPTREMBLF1QP87, F1QP87_DANRE

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