D. rerio Gene: rab32a - ENSDARG00000029036 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000029036
Namerab32a
DescriptionRAB32a, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-031006-10]
OrganismDanio rerio (zebrafish)
Synonym(s)cb914, hm:zehn1770, rab32, zgc:110481
Orthologs(s)20 orthologs
Paralog(s)7 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.82e3
  • 1.82e3
  • 1.92e3
  • 1.95e3
  • 2.33e3
  • 2.35e3
93.92
  • 93.92
  • 93.56
  • 93.47
  • 92.20
  • 92.12
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.89e3
  • 1.89e3
93.68
  • 93.68
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.95e3
  • 1.95e3
93.46
  • 93.46
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
2.11e3
  • 2.11e3
  • 1.24e4
92.95
  • 92.95
  • 58.33
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.35e3
  • 2.35e3
92.13
  • 92.13
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
2.69e3
  • 2.69e3
  • 4.91e3
91.00
  • 91.00
  • 83.55
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
2.69e3
  • 2.69e3
90.98
  • 90.98
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.93e3
  • 2.93e3
90.19
  • 90.19
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
2.94e3
  • 2.94e3
  • 3.91e3
  • 8.50e3
  • 8.62e3
  • 8.98e3
  • 9.07e3
  • 9.26e3
  • 9.38e3
  • 9.48e3
  • 9.69e3
  • 1.06e4
  • 1.11e4
  • 1.13e4
  • 1.14e4
90.15
  • 90.15
  • 86.92
  • 71.56
  • 71.15
  • 69.92
  • 69.64
  • 68.98
  • 68.59
  • 68.26
  • 67.55
  • 64.54
  • 62.92
  • 62.09
  • 61.66
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
3.02e3
  • 3.02e3
89.90
  • 89.90
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
3.04e3
  • 3.04e3
89.83
  • 89.83
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
3.60e3
  • 3.60e3
87.94
  • 87.94
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
3.77e3
  • 3.77e3
87.40
  • 87.40
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
3.91e3
  • 3.91e3
  • 4.74e3
  • 9.48e3
  • 1.03e4
  • 1.19e4
  • 1.19e4
86.91
  • 86.91
  • 84.11
  • 68.25
  • 65.43
  • 60.06
  • 60.06
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
3.94e3
  • 3.94e3
86.82
  • 86.82
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.30e3
  • 5.30e3
82.24
  • 82.24
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.69e3
  • 5.69e3
80.94
  • 80.94
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
6.09e3
  • 6.09e3
79.63
  • 79.63
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
6.37e3
  • 6.37e3
78.66
  • 78.66
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
6.71e3
  • 6.71e3
77.52
  • 77.52
AEIR
  • AEIR
CL:0000147pigment cell
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 9.96e3
  • 1.16e4
  • 1.37e4
  • 1.37e4
75.00
  • 75.00
  • 75.00
  • 75.00
  • 66.66
  • 61.10
  • 54.15
  • 54.15
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2000164ventral mesenchyme
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
74.99
  • 74.99
  • 74.99
  • 74.99
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000037Larval:Day 5
7.54e3
  • 7.54e3
  • 7.75e3
  • 7.76e3
  • 9.06e3
  • 9.07e3
  • 9.08e3
  • 1.02e4
  • 1.17e4
  • 1.18e4
  • 1.21e4
74.77
  • 74.77
  • 74.07
  • 74.02
  • 69.68
  • 69.64
  • 69.59
  • 65.95
  • 60.82
  • 60.45
  • 59.61
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
7.87e3
  • 7.87e3
  • 1.37e4
73.65
  • 73.65
  • 54.02
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
8.33e3
  • 8.33e3
  • 9.38e3
  • 1.17e4
  • 1.19e4
72.10
  • 72.10
  • 68.58
  • 60.72
  • 60.07
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0010312immature eye
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
8.65e3
  • 8.65e3
  • 8.79e3
  • 9.25e3
  • 9.96e3
71.04
  • 71.04
  • 70.57
  • 69.03
  • 66.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0010170region of neural crest
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
8.71e3
  • 8.71e3
  • 8.96e3
  • 9.51e3
70.82
  • 70.82
  • 69.99
  • 68.17
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
8.88e3
  • 8.88e3
  • 1.09e4
70.27
  • 70.27
  • 63.57
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
9.40e3
  • 9.40e3
68.54
  • 68.54
AEIR
  • AEIR
UBERON:2000001Kupffer's vesicle
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
9.96e3
  • 9.96e3
  • 1.03e4
  • 1.03e4
66.66
  • 66.66
  • 65.37
  • 65.37
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
1.02e4
  • 1.02e4
  • 1.03e4
  • 1.18e4
65.86
  • 65.86
  • 65.48
  • 60.56
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002328notochord
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000029Pharyngula:Prim-5
1.05e4
  • 1.05e4
  • 1.08e4
  • 1.20e4
  • 1.22e4
  • 1.22e4
  • 1.34e4
64.99
  • 64.99
  • 63.97
  • 59.98
  • 59.06
  • 59.06
  • 54.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.05e4
  • 1.05e4
64.86
  • 64.86
AEIR
  • AEIR
UBERON:0003068axial mesoderm
  • ZFS:0000020Gastrula:75%-epiboly
1.07e4
  • 1.07e4
64.28
  • 64.28
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
  • 1.31e4
64.16
  • 64.16
  • 56.15
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.01
  • 64.01
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.09e4
  • 1.09e4
63.40
  • 63.40
AEIR
  • AEIR
UBERON:0003062primitive knot
  • ZFS:0000019Gastrula:Shield
1.22e4
  • 1.22e4
59.08
  • 59.08
AEIR
  • AEIR
UBERON:0006859swim bladder bud
  • ZFS:0000033Hatching:Long-pec
1.24e4
  • 1.24e4
58.33
  • 58.33
AEIR
  • AEIR
UBERON:0004880chordamesoderm
  • ZFS:0000020Gastrula:75%-epiboly
1.26e4
  • 1.26e4
57.68
  • 57.68
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.30e4
  • 1.30e4
56.33
  • 56.33
AEIR
  • AEIR
UBERON:0001782pigmented layer of retina
  • ZFS:0000033Hatching:Long-pec
1.49e4
  • 1.49e4
49.99
  • 49.99
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi19 species19 genesCompare expression
Bilateria20 species20 genesCompare expression

Orthology information comes from OMA : ENSDARG00000029036.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression
Opisthokonta7 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000029036.

Cross-references

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