D. rerio Gene: nupl2 - ENSDARG00000029043 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000029043
Namenupl2
Descriptionnucleoporin like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2292]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:77724
Orthologs(s)21 orthologs
Paralog(s)439 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
726
  • 726
  • 1.38e4
97.57
  • 97.57
  • 53.77
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.95e3
  • 1.95e3
  • 1.43e4
93.47
  • 93.47
  • 52.10
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
3.36e3
  • 3.36e3
  • 4.71e3
  • 5.57e3
  • 7.48e3
  • 7.63e3
  • 7.96e3
88.77
  • 88.77
  • 84.23
  • 81.35
  • 74.95
  • 74.47
  • 73.35
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
4.27e3
  • 4.27e3
85.70
  • 85.70
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
4.88e3
  • 4.88e3
  • 6.77e3
  • 8.71e3
  • 9.37e3
  • 9.63e3
83.66
  • 83.66
  • 77.34
  • 70.85
  • 68.64
  • 67.75
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000106zygote stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000049segmentation
  • ZFS:0000037Larval:Day 5
  • ZFS:0000042Juvenile:Days 30-44
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
4.98e3
  • 4.98e3
  • 6.54e3
  • 6.64e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.97e3
  • 7.03e3
  • 7.47e3
  • 7.47e3
  • 7.54e3
  • 7.91e3
  • 8.18e3
  • 8.29e3
  • 8.96e3
  • 8.96e3
  • 9.08e3
  • 9.62e3
  • 1.01e4
  • 1.19e4
  • 1.24e4
  • 1.29e4
  • 1.36e4
  • 1.37e4
  • 1.44e4
  • 1.45e4
  • 1.45e4
  • 1.48e4
  • 1.49e4
  • 1.50e4
83.33
  • 83.33
  • 78.12
  • 77.77
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 76.66
  • 76.46
  • 74.99
  • 74.99
  • 74.77
  • 73.52
  • 72.62
  • 72.25
  • 69.99
  • 69.99
  • 69.59
  • 67.80
  • 66.21
  • 60.23
  • 58.41
  • 56.69
  • 54.62
  • 54.17
  • 51.84
  • 51.51
  • 51.32
  • 50.61
  • 50.20
  • 49.81
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
5.77e3
  • 5.77e3
80.67
  • 80.67
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
6.07e3
  • 6.07e3
79.68
  • 79.68
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
6.44e3
  • 6.44e3
78.45
  • 78.45
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
6.46e3
  • 6.46e3
78.36
  • 78.36
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0000068embryo stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
6.99e3
  • 6.99e3
  • 8.33e3
  • 1.01e4
  • 1.05e4
  • 1.10e4
  • 1.14e4
  • 1.18e4
  • 1.21e4
  • 1.30e4
  • 1.31e4
76.58
  • 76.58
  • 72.11
  • 66.30
  • 64.90
  • 63.16
  • 61.95
  • 60.38
  • 59.36
  • 56.40
  • 55.98
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
7.02e3
  • 7.02e3
76.50
  • 76.50
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
7.17e3
  • 7.17e3
  • 1.23e4
75.98
  • 75.98
  • 58.66
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
7.21e3
  • 7.21e3
75.86
  • 75.86
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
7.35e3
  • 7.35e3
75.39
  • 75.39
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
7.50e3
  • 7.50e3
74.89
  • 74.89
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
7.64e3
  • 7.64e3
  • 1.16e4
74.43
  • 74.43
  • 61.09
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
8.32e3
  • 8.32e3
72.15
  • 72.15
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
8.76e3
  • 8.76e3
70.68
  • 70.68
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
8.87e3
  • 8.87e3
  • 9.73e3
  • 9.93e3
  • 1.05e4
70.30
  • 70.30
  • 67.41
  • 66.74
  • 64.69
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.11e3
  • 9.11e3
69.51
  • 69.51
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
9.18e3
  • 9.18e3
69.26
  • 69.26
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
9.33e3
  • 9.33e3
68.76
  • 68.76
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
9.50e3
  • 9.50e3
68.20
  • 68.20
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
9.90e3
  • 9.90e3
  • 1.34e4
66.86
  • 66.86
  • 55.28
AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.02e4
  • 1.02e4
65.98
  • 65.98
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.10e4
  • 1.10e4
63.02
  • 63.02
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
1.13e4
  • 1.13e4
  • 1.15e4
  • 1.43e4
62.05
  • 62.05
  • 61.54
  • 52.26
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.17e4
  • 1.17e4
  • 1.19e4
60.75
  • 60.75
  • 60.10
AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.21e4
  • 1.21e4
59.58
  • 59.58
AEIR
  • AEIR
UBERON:0000080mesonephros
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.88
  • 49.88
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.52e4
  • 1.52e4
49.27
  • 49.27
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.90e4
  • 1.90e4
36.50
  • 36.50
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Eukaryota439 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000029043.

Cross-references

EnsemblENSDARG00000029043 (nupl2)
ZFINZDB-GENE-040426-2292 (nupl2)
EMBLBC065440
Uniprot/SWISSPROTNUPL2_DANRE, Q6P0U9

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