D. rerio Gene: tm6sf2 - ENSDARG00000029057 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000029057
Nametm6sf2
Descriptiontransmembrane 6 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-060503-338]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkey-19f23.3, zgc:158825
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
3.03e3
  • 3.03e3
89.86
  • 89.86
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
7.96e3
  • 7.96e3
  • 8.79e3
73.34
  • 73.34
  • 70.57
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.01e4
  • 1.01e4
  • 1.18e4
66.12
  • 66.12
  • 60.64
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
1.14e4
  • 1.14e4
  • 1.22e4
  • 1.44e4
  • 1.54e4
  • 1.80e4
61.74
  • 61.74
  • 59.07
  • 51.67
  • 48.54
  • 39.89
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.85e4
  • 1.85e4
38.12
  • 38.12
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000029057.

Cross-references

EnsemblENSDARG00000029057 (tm6sf2)
ZFINZDB-GENE-060503-338 (tm6sf2)
EMBLBX908731
Uniprot/SPTREMBLQ1LV23, Q1LV23_DANRE

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