D. rerio Gene: med23 - ENSDARG00000029157 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000029157
Namemed23
Descriptionmediator complex subunit 23 [Source:ZFIN;Acc:ZDB-GENE-040724-82]
OrganismDanio rerio (zebrafish)
Synonym(s)b8a4g5, crsp3, q68eg9, si:ch211-272f15.2, zgc:91979

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
2.48e3
  • 2.48e3
  • 4.19e3
91.71
  • 91.71
  • 85.98
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
3.51e3
  • 3.51e3
  • 3.63e3
  • 4.87e3
  • 8.22e3
  • 9.88e3
88.25
  • 88.25
  • 87.85
  • 83.71
  • 72.49
  • 66.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
4.41e3
  • 4.41e3
  • 7.03e3
  • 1.30e4
  • 1.49e4
  • 1.50e4
  • 1.50e4
85.22
  • 85.22
  • 76.46
  • 56.55
  • 50.25
  • 49.92
  • 49.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
4.64e3
  • 4.64e3
  • 6.16e3
84.48
  • 84.48
  • 79.36
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
5.14e3
  • 5.14e3
82.78
  • 82.78
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
5.22e3
  • 5.22e3
  • 1.17e4
82.51
  • 82.51
  • 60.86
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
5.84e3
  • 5.84e3
  • 1.06e4
80.46
  • 80.46
  • 64.50
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
6.63e3
  • 6.63e3
77.80
  • 77.80
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
6.79e3
  • 6.79e3
77.28
  • 77.28
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
6.92e3
  • 6.92e3
76.83
  • 76.83
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
7.36e3
  • 7.36e3
75.36
  • 75.36
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
7.65e3
  • 7.65e3
74.37
  • 74.37
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
8.32e3
  • 8.32e3
72.13
  • 72.13
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
8.61e3
  • 8.61e3
  • 1.27e4
71.19
  • 71.19
  • 57.47
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
8.67e3
  • 8.67e3
70.98
  • 70.98
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
8.79e3
  • 8.79e3
70.58
  • 70.58
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
9.17e3
  • 9.17e3
69.30
  • 69.30
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
9.25e3
  • 9.25e3
69.02
  • 69.02
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
9.88e3
  • 9.88e3
66.92
  • 66.92
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.01
  • 65.01
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.99
  • 64.99
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.97
  • 64.97
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.61
  • 64.61
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
60.65
  • 60.65
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
59.88
  • 59.88
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.94
  • 49.94
AEIR
  • AEIR
UBERON:0000080mesonephros
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.88
  • 49.88
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.70e4
  • 1.70e4
43.09
  • 43.09
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.86
  • 40.86
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLBC080264, BX072559
EnsemblENSDARG00000029157 (med23)
Uniprot/SPTREMBLB8A4G4, B8A4G4_DANRE
Uniprot/SWISSPROTMED23_DANRE, Q5RIW8
ZFINZDB-GENE-040724-82 (med23)

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