D. rerio Gene: pnp4b - ENSDARG00000029230 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000029230
Namepnp4b
Descriptionpurine nucleoside phosphorylase 4b [Source:ZFIN;Acc:ZDB-GENE-040426-1887]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:77825

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
81.1
  • 81.1
  • 9.34e3
99.73
  • 99.73
  • 68.74
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
280
  • 280
99.07
  • 99.07
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
958
  • 958
96.80
  • 96.80
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.00e3
  • 1.00e3
96.65
  • 96.65
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.24e3
  • 1.24e3
  • 1.42e4
95.85
  • 95.85
  • 52.45
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.27e3
  • 1.27e3
  • 1.58e4
95.74
  • 95.74
  • 46.99
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
1.48e3
  • 1.48e3
  • 1.65e4
  • 2.13e4
  • 2.21e4
  • 2.33e4
95.06
  • 95.06
  • 44.88
  • 28.73
  • 26.02
  • 22.13
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • UBERON:0000104life cycle
2.20e3
  • 2.20e3
  • 1.07e4
  • 1.15e4
  • 1.23e4
  • 1.47e4
92.65
  • 92.65
  • 64.27
  • 61.60
  • 58.80
  • 50.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
3.39e3
  • 3.39e3
88.64
  • 88.64
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.80
  • 64.80
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.51e4
  • 1.51e4
  • 1.86e4
49.60
  • 49.60
  • 37.71
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.51e4
  • 1.51e4
49.55
  • 49.55
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.72e4
  • 1.72e4
42.25
  • 42.25
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.73e4
  • 1.73e4
42.23
  • 42.23
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.76e4
  • 1.76e4
41.16
  • 41.16
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.90e4
  • 1.90e4
36.37
  • 36.37
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.04e4
  • 2.04e4
31.62
  • 31.62
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.10e4
  • 2.10e4
29.62
  • 29.62
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

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