Gene: ipmkb - ENSDARG00000029291 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000029291
Name	ipmkb
Description	inositol polyphosphate multikinase b [Source:ZFIN;Acc:ZDB-GENE-061215-5]
Organism	Danio rerio (zebrafish)
Synonym(s)	ipk2, zgc:158331
Orthologs(s)	17 orthologs
Paralog(s)	1 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	498 498	98.34 98.34	AEIR AEIR
UBERON:0000307	blastula	[+] 2 stages ZFS:0000015Blastula:Dome ZFS:0000011Blastula:1k-cell	2.91e3 2.91e3 3.10e3	90.25 90.25 89.62	AEIR AEIR AEIR
UBERON:0019248	early embryo	[+] 1 stage UBERON:0000107cleavage stage	4.74e3 4.74e3	84.12 84.12	AEIR AEIR
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000066fully formed stage	5.07e3 5.07e3	83.03 83.03	AEIR AEIR
UBERON:0000966	retina	[+] 1 stage ZFS:0000037Larval:Day 5	5.15e3 5.15e3	82.77 82.77	AEIR AEIR
UBERON:0004734	gastrula	[+] 2 stages ZFS:0000019Gastrula:Shield ZFS:0000022Gastrula:Bud	5.23e3 5.23e3 7.99e3	82.50 82.50 73.26	AEIR AEIR AEIR
UBERON:0000033	head	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000066fully formed stage	5.60e3 5.60e3 5.72e3	81.25 81.25 80.85	AEIR AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	5.74e3 5.74e3	80.79 80.79	AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	7.09e3 7.09e3	76.28 76.28	AEIR AEIR
UBERON:0000922	embryo	[+] 5 stages ZFS:0000033Hatching:Long-pec ZFS:0000037Larval:Day 5 ZFS:0000029Pharyngula:Prim-5 UBERON:0000068embryo stage UBERON:0004707pharyngula stage	7.22e3 7.22e3 9.78e3 1.09e4 1.12e4 1.12e4	75.82 75.82 67.25 63.53 62.49 62.44	AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0003982	mature ovarian follicle	[+] 1 stage UBERON:0000066fully formed stage	7.25e3 7.25e3	75.74 75.74	AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000066fully formed stage	7.45e3 7.45e3	75.07 75.07	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	7.54e3 7.54e3	74.76 74.76	AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	8.08e3 8.08e3	72.93 72.93	AEIR AEIR
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	8.62e3 8.62e3	71.14 71.14	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	8.77e3 8.77e3	70.64 70.64	AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	9.14e3 9.14e3	69.41 69.41	AEIR AEIR
CL:0000094	granulocyte	[+] 1 stage UBERON:0000066fully formed stage	9.15e3 9.15e3	69.38 69.38	AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	9.32e3 9.32e3	68.78 68.78	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	1.00e4 1.00e4	66.48 66.48	AEIR AEIR
UBERON:0002548	larva	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000069larval stage	1.00e4 1.00e4 1.25e4	66.47 66.47 58.01	AEIR AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000066fully formed stage	1.02e4 1.02e4	65.95 65.95	AEIR AEIR
UBERON:0000948	heart	[+] 2 stages UBERON:0000066fully formed stage ZFS:0000036Larval:Day 4	1.06e4 1.06e4 1.17e4	64.40 64.40 60.83	AEIR AEIR AEIR
UBERON:0001630	muscle organ	[+] 1 stage UBERON:0000066fully formed stage	1.14e4 1.14e4	61.79 61.79	AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000066fully formed stage	1.19e4 1.19e4	60.01 60.01	AEIR AEIR
UBERON:0000970	eye	[+] 1 stage ZFS:0000031Pharyngula:Prim-25	1.22e4 1.22e4	59.30 59.30	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Euteleostomi	16 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Ornithorhynchus anatinus (platypus) Gallus gallus (chicken) Anolis carolinensis (green anole) Xenopus tropicalis (western clawed frog)	17 genes ENSG00000151151 IPMK ENSMUSG00000060733 Ipmk ENSPTRG00000002516 IPMK ENSGGOG00000008790 IPMK ENSGGOG00000027144 ENSMMUG00000019822 IPMK ENSRNOG00000000609 Ipmk ENSBTAG00000011197 IPMK ENSECAG00000008002 IPMK ENSOCUG00000006432 IPMK ENSFCAG00000031537 ENSCPOG00000000222 IPMK ENSEEUG00000009958 IPMK ENSOANG00000004610 IPMK ENSGALG00000002710 IPMK ENSACAG00000004374 IPMK ENSXETG00000005113 ipmk	Compare expression	[+]

Orthology information comes from OMA : ENSDARG00000029291.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Vertebrata	1 gene ENSDARG00000076699 ipmka	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000029291.

Cross-references

Ensembl	ENSDARG00000029291 (ipmkb)
ZFIN	ZDB-GENE-061215-5 (ipmkb)
EMBL	BC128841, CU326359
Uniprot/SPTREMBL	A1A5W8, A1A5W8_DANRE, R4GEW5, R4GEW5_DANRE