D. rerio Gene: si:ch211-134n22.1 - ENSDARG00000029296 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000029296
Namesi:ch211-134n22.1
Descriptionsi:ch211-134n22.1 [Source:ZFIN;Acc:ZDB-GENE-140106-18]
OrganismDanio rerio (zebrafish)
Synonym(s)gb:eb776709, kiaa2022, zmp:0000001058

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
6.24e3
  • 6.24e3
79.10
  • 79.10
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
8.20e3
  • 8.20e3
  • 1.40e4
72.53
  • 72.53
  • 53.14
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
8.97e3
  • 8.97e3
69.97
  • 69.97
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
9.44e3
  • 9.44e3
  • 1.14e4
  • 1.58e4
  • 1.60e4
  • 1.69e4
68.39
  • 68.39
  • 61.98
  • 47.20
  • 46.44
  • 43.38
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.30e4
  • 1.30e4
  • 1.62e4
56.57
  • 56.57
  • 45.72
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.39e4
  • 1.39e4
53.36
  • 53.36
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
50.08
  • 50.08
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.55e4
  • 1.55e4
  • 1.59e4
48.04
  • 48.04
  • 46.64
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.60e4
  • 1.60e4
46.47
  • 46.47
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.67e4
  • 1.67e4
44.06
  • 44.06
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.93e4
  • 1.93e4
35.52
  • 35.52
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.96e4
  • 1.96e4
34.44
  • 34.44
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
2.03e4
  • 2.03e4
32.07
  • 32.07
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.13e4
  • 2.13e4
28.66
  • 28.66
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSDARG00000029296 (si:ch211-134n22.1)
Uniprot/SPTREMBLF1QPA3, F1QPA3_DANRE
ZFINZDB-GENE-140106-18 (si:ch211-134n22.1)

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