D. rerio Gene: camk1b - ENSDARG00000029474 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000029474
Namecamk1b
Descriptioncalcium/calmodulin-dependent protein kinase Ib [Source:ZFIN;Acc:ZDB-GENE-141014-1]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
3.80e3
  • 3.80e3
87.28
  • 87.28
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
5.26e3
  • 5.26e3
82.37
  • 82.37
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
5.77e3
  • 5.77e3
80.70
  • 80.70
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
6.65e3
  • 6.65e3
  • 8.83e3
77.75
  • 77.75
  • 70.45
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
6.89e3
  • 6.89e3
76.92
  • 76.92
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
7.39e3
  • 7.39e3
  • 1.02e4
  • 1.04e4
  • 1.14e4
  • 1.20e4
75.26
  • 75.26
  • 65.95
  • 65.10
  • 61.86
  • 59.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
7.48e3
  • 7.48e3
  • 1.11e4
74.95
  • 74.95
  • 62.99
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
8.03e3
  • 8.03e3
73.11
  • 73.11
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
8.08e3
  • 8.08e3
72.93
  • 72.93
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.42e3
  • 8.42e3
71.82
  • 71.82
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
9.13e3
  • 9.13e3
69.43
  • 69.43
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
9.29e3
  • 9.29e3
68.90
  • 68.90
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.00e4
  • 1.00e4
66.38
  • 66.38
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.04e4
  • 1.04e4
  • 1.14e4
65.21
  • 65.21
  • 61.67
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.85
  • 64.85
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
62.49
  • 62.49
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.14e4
  • 1.14e4
61.70
  • 61.70
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.17e4
  • 1.17e4
  • 1.37e4
60.91
  • 60.91
  • 54.25
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.24e4
  • 1.24e4
58.48
  • 58.48
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
55.04
  • 55.04
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.43e4
  • 1.43e4
52.01
  • 52.01
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
50.51
  • 50.51
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.62e4
  • 1.62e4
45.80
  • 45.80
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLBX248331, BX571768
EnsemblENSDARG00000029474 (camk1b)
Uniprot/SPTREMBLE7F1H0, E7F1H0_DANRE
ZFINZDB-GENE-141014-1 (camk1b)

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