D. rerio Gene: pgp - ENSDARG00000029695 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000029695
Namepgp
Descriptionphosphoglycolate phosphatase [Source:ZFIN;Acc:ZDB-GENE-030131-6240]
OrganismDanio rerio (zebrafish)
Synonym(s)cb241, sb:cb241, wu:fb92c03, wu:fi40b02, zgc:56011

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
1.03e3
  • 1.03e3
  • 1.94e3
  • 3.26e3
  • 9.88e3
  • 1.29e4
96.55
  • 96.55
  • 93.50
  • 89.08
  • 66.92
  • 56.84
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
1.15e3
  • 1.15e3
  • 1.02e4
  • 1.18e4
  • 1.19e4
96.15
  • 96.15
  • 65.89
  • 60.39
  • 60.31
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.77e3
  • 1.77e3
94.09
  • 94.09
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
2.05e3
  • 2.05e3
93.15
  • 93.15
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
2.68e3
  • 2.68e3
91.03
  • 91.03
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000068embryo stage
  • ZFS:0000049segmentation
  • UBERON:0000104life cycle
2.72e3
  • 2.72e3
  • 6.82e3
  • 8.42e3
  • 9.63e3
  • 9.66e3
  • 1.02e4
  • 1.03e4
  • 1.07e4
  • 1.15e4
  • 1.17e4
  • 1.17e4
  • 1.23e4
  • 1.23e4
  • 1.28e4
  • 1.34e4
  • 1.48e4
  • 1.49e4
  • 1.50e4
90.90
  • 90.90
  • 77.17
  • 71.82
  • 67.75
  • 67.66
  • 65.92
  • 65.48
  • 64.05
  • 61.36
  • 60.99
  • 60.71
  • 58.89
  • 58.87
  • 57.23
  • 55.03
  • 50.61
  • 49.95
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
2.86e3
  • 2.86e3
  • 1.32e4
90.41
  • 90.41
  • 55.79
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.89e3
  • 2.89e3
90.33
  • 90.33
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
3.73e3
  • 3.73e3
87.51
  • 87.51
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
3.98e3
  • 3.98e3
86.66
  • 86.66
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
4.29e3
  • 4.29e3
  • 7.55e3
  • 8.96e3
  • 1.02e4
85.63
  • 85.63
  • 74.73
  • 70.01
  • 65.82
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
  • ZFS:0000035Larval:Protruding-mouth
4.36e3
  • 4.36e3
  • 5.54e3
  • 1.21e4
85.40
  • 85.40
  • 81.44
  • 59.59
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
4.56e3
  • 4.56e3
84.75
  • 84.75
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
4.65e3
  • 4.65e3
  • 4.79e3
  • 6.49e3
  • 7.09e3
  • 7.21e3
  • 7.53e3
  • 7.57e3
  • 7.87e3
  • 8.65e3
  • 1.15e4
84.43
  • 84.43
  • 83.95
  • 78.28
  • 76.27
  • 75.86
  • 74.79
  • 74.65
  • 73.66
  • 71.05
  • 61.54
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
4.73e3
  • 4.73e3
  • 6.28e3
  • 7.79e3
84.17
  • 84.17
  • 78.96
  • 73.92
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.80e3
  • 4.80e3
83.92
  • 83.92
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.82e3
  • 4.82e3
83.86
  • 83.86
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
5.13e3
  • 5.13e3
  • 9.73e3
82.82
  • 82.82
  • 67.42
AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
5.22e3
  • 5.22e3
82.51
  • 82.51
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.27e3
  • 5.27e3
82.37
  • 82.37
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
5.53e3
  • 5.53e3
81.50
  • 81.50
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
5.60e3
  • 5.60e3
81.24
  • 81.24
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
6.07e3
  • 6.07e3
79.69
  • 79.69
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
6.14e3
  • 6.14e3
79.45
  • 79.45
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
6.18e3
  • 6.18e3
79.32
  • 79.32
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
6.46e3
  • 6.46e3
  • 9.40e3
78.37
  • 78.37
  • 68.53
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
6.76e3
  • 6.76e3
77.38
  • 77.38
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
7.06e3
  • 7.06e3
  • 1.03e4
76.37
  • 76.37
  • 65.60
AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
7.49e3
  • 7.49e3
74.93
  • 74.93
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
7.57e3
  • 7.57e3
74.66
  • 74.66
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
8.22e3
  • 8.22e3
  • 1.44e4
72.48
  • 72.48
  • 51.84
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
8.45e3
  • 8.45e3
  • 1.13e4
  • 1.14e4
  • 1.20e4
  • 1.45e4
  • 1.52e4
71.72
  • 71.72
  • 62.14
  • 61.89
  • 59.73
  • 51.53
  • 49.02
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
8.98e3
  • 8.98e3
69.94
  • 69.94
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
9.09e3
  • 9.09e3
69.57
  • 69.57
AEIR
  • AEIR
ZFA:0000003adaxial cell (Danio)
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
9.34e3
  • 9.34e3
  • 9.67e3
  • 1.08e4
  • 1.16e4
68.74
  • 68.74
  • 67.63
  • 63.87
  • 61.09
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003069otic placode
  • ZFS:0000026Segmentation:14-19 somites
1.10e4
  • 1.10e4
63.14
  • 63.14
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
1.14e4
  • 1.14e4
  • 1.20e4
  • 1.20e4
  • 1.23e4
  • 1.25e4
  • 1.25e4
  • 1.29e4
  • 1.29e4
  • 1.29e4
  • 1.41e4
61.88
  • 61.88
  • 59.98
  • 59.98
  • 58.80
  • 58.31
  • 58.31
  • 56.65
  • 56.65
  • 56.65
  • 52.75
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
  • 1.46e4
55.16
  • 55.16
  • 51.26
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLCT009714
EnsemblENSDARG00000029695 (pgp)
Uniprot/SPTREMBLF1QGU0, F1QGU0_DANRE
ZFINZDB-GENE-030131-6240 (pgp)

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