D. rerio Gene: fam213b - ENSDARG00000029795 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000029795
Namefam213b
Descriptionfamily with sequence similarity 213, member B [Source:ZFIN;Acc:ZDB-GENE-040426-2556]
OrganismDanio rerio (zebrafish)
Synonym(s)prxl2, sb:cb782, wu:fc33a02, zgc:85644
Orthologs(s)15 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
1.22e3
  • 1.22e3
  • 2.33e3
  • 3.72e3
  • 4.10e3
  • 6.01e3
95.93
  • 95.93
  • 92.19
  • 87.55
  • 86.28
  • 79.89
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.28e3
  • 1.28e3
95.73
  • 95.73
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.58e3
  • 1.58e3
94.71
  • 94.71
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.92e3
  • 2.92e3
90.23
  • 90.23
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
3.29e3
  • 3.29e3
88.99
  • 88.99
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
3.32e3
  • 3.32e3
88.90
  • 88.90
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
3.59e3
  • 3.59e3
  • 8.97e3
  • 1.04e4
87.99
  • 87.99
  • 69.98
  • 65.26
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
3.78e3
  • 3.78e3
87.35
  • 87.35
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
3.80e3
  • 3.80e3
87.27
  • 87.27
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
3.87e3
  • 3.87e3
87.04
  • 87.04
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
4.18e3
  • 4.18e3
  • 5.96e3
  • 6.02e3
  • 7.52e3
  • 8.10e3
  • 8.91e3
86.00
  • 86.00
  • 80.05
  • 79.83
  • 74.82
  • 72.88
  • 70.15
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
4.31e3
  • 4.31e3
  • 4.45e3
  • 4.62e3
  • 5.36e3
  • 5.93e3
  • 6.27e3
  • 6.52e3
  • 6.92e3
  • 9.31e3
  • 9.73e3
85.58
  • 85.58
  • 85.10
  • 84.55
  • 82.07
  • 80.16
  • 78.99
  • 78.18
  • 76.83
  • 68.82
  • 67.43
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
4.32e3
  • 4.32e3
85.52
  • 85.52
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000106zygote stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000033Hatching:Long-pec
4.53e3
  • 4.53e3
  • 6.47e3
  • 6.71e3
  • 7.29e3
  • 7.32e3
  • 7.56e3
  • 7.62e3
  • 7.75e3
  • 7.81e3
  • 7.92e3
  • 8.00e3
  • 8.08e3
  • 8.28e3
  • 9.51e3
84.83
  • 84.83
  • 78.35
  • 77.53
  • 75.60
  • 75.48
  • 74.70
  • 74.48
  • 74.06
  • 73.84
  • 73.49
  • 73.20
  • 72.95
  • 72.27
  • 68.16
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
4.56e3
  • 4.56e3
84.72
  • 84.72
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.74e3
  • 4.74e3
84.14
  • 84.14
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.75e3
  • 4.75e3
84.09
  • 84.09
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
5.47e3
  • 5.47e3
81.70
  • 81.70
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
5.66e3
  • 5.66e3
81.06
  • 81.06
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
6.59e3
  • 6.59e3
  • 1.44e4
77.94
  • 77.94
  • 51.85
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
6.60e3
  • 6.60e3
77.91
  • 77.91
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
6.65e3
  • 6.65e3
  • 1.21e4
77.74
  • 77.74
  • 59.65
AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
7.09e3
  • 7.09e3
76.25
  • 76.25
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
7.29e3
  • 7.29e3
  • 8.35e3
75.58
  • 75.58
  • 72.03
AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
7.81e3
  • 7.81e3
  • 1.29e4
73.84
  • 73.84
  • 56.97
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
7.84e3
  • 7.84e3
73.76
  • 73.76
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
8.03e3
  • 8.03e3
73.12
  • 73.12
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
8.96e3
  • 8.96e3
70.00
  • 70.00
AEIR
  • AEIR
UBERON:0001555digestive tract
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
8.96e3
  • 8.96e3
  • 9.19e3
  • 9.60e3
  • 1.12e4
  • 1.15e4
  • 1.17e4
  • 1.17e4
69.99
  • 69.99
  • 69.22
  • 67.85
  • 62.48
  • 61.53
  • 60.70
  • 60.70
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
9.20e3
  • 9.20e3
  • 9.63e3
69.18
  • 69.18
  • 67.75
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
9.21e3
  • 9.21e3
69.18
  • 69.18
AEIR
  • AEIR
UBERON:0003060pronephric duct
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000026Segmentation:14-19 somites
1.05e4
  • 1.05e4
  • 1.05e4
  • 1.10e4
  • 1.41e4
64.98
  • 64.98
  • 64.98
  • 63.14
  • 52.75
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.24
  • 63.24
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.10e4
  • 1.10e4
63.01
  • 63.01
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Cross-references

EnsemblENSDARG00000029795 (fam213b)
ZFINZDB-GENE-040426-2556 (fam213b)
EMBLAL954137
Uniprot/SPTREMBLE7FBD2, E7FBD2_DANRE, F1QSW9, F1QSW9_DANRE

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