D. rerio Gene: cnn3b - ENSDARG00000029856 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000029856
Namecnn3b
Descriptioncalponin 3, acidic b [Source:ZFIN;Acc:ZDB-GENE-050522-263]
OrganismDanio rerio (zebrafish)
Synonym(s)hm:zehn1486, wu:fa99a06, zehn1486, zgc:112050, zgc:123208

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
226
  • 226
99.25
  • 99.25
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
317
  • 317
98.94
  • 98.94
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
473
  • 473
  • 544
  • 1.05e3
  • 1.36e3
  • 1.98e3
98.42
  • 98.42
  • 98.18
  • 96.49
  • 95.45
  • 93.36
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
802
  • 802
  • 1.52e3
  • 1.75e3
  • 2.06e3
  • 2.21e3
  • 2.85e3
97.32
  • 97.32
  • 94.90
  • 94.14
  • 93.12
  • 92.60
  • 90.47
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
902
  • 902
  • 2.03e3
  • 2.80e3
  • 3.16e3
  • 3.52e3
  • 3.82e3
  • 3.89e3
  • 4.20e3
  • 4.42e3
  • 5.28e3
  • 6.22e3
  • 9.46e3
  • 9.72e3
  • 1.01e4
  • 1.34e4
  • 1.41e4
  • 1.50e4
96.98
  • 96.98
  • 93.20
  • 90.61
  • 89.43
  • 88.20
  • 87.20
  • 86.99
  • 85.95
  • 85.19
  • 82.32
  • 79.16
  • 68.32
  • 67.44
  • 66.34
  • 55.06
  • 52.87
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.02e3
  • 1.02e3
96.60
  • 96.60
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.81e3
  • 1.81e3
93.93
  • 93.93
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.95e3
  • 1.95e3
93.46
  • 93.46
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000025Segmentation:10-13 somites
  • UBERON:0000068embryo stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
2.20e3
  • 2.20e3
  • 2.40e3
  • 2.42e3
  • 2.57e3
  • 2.62e3
  • 2.83e3
  • 2.95e3
  • 3.35e3
  • 3.85e3
  • 6.67e3
92.64
  • 92.64
  • 91.96
  • 91.91
  • 91.41
  • 91.24
  • 90.53
  • 90.12
  • 88.80
  • 87.12
  • 77.66
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
2.33e3
  • 2.33e3
92.21
  • 92.21
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
2.46e3
  • 2.46e3
  • 3.28e3
  • 1.22e4
91.77
  • 91.77
  • 89.01
  • 59.08
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
2.77e3
  • 2.77e3
90.73
  • 90.73
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
2.95e3
  • 2.95e3
  • 1.09e4
90.13
  • 90.13
  • 63.55
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
3.03e3
  • 3.03e3
89.87
  • 89.87
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
3.22e3
  • 3.22e3
89.22
  • 89.22
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
3.97e3
  • 3.97e3
  • 4.15e3
86.71
  • 86.71
  • 86.11
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.18e3
  • 4.18e3
86.00
  • 86.00
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
4.66e3
  • 4.66e3
84.40
  • 84.40
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.19e3
  • 5.19e3
82.62
  • 82.62
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
5.26e3
  • 5.26e3
82.39
  • 82.39
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
5.36e3
  • 5.36e3
82.05
  • 82.05
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.57e3
  • 5.57e3
81.34
  • 81.34
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.83e3
  • 5.83e3
80.47
  • 80.47
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
5.85e3
  • 5.85e3
80.42
  • 80.42
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
6.21e3
  • 6.21e3
  • 6.72e3
79.20
  • 79.20
  • 77.49
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
6.55e3
  • 6.55e3
  • 6.68e3
  • 6.72e3
78.07
  • 78.07
  • 77.62
  • 77.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.80e3
  • 6.80e3
77.22
  • 77.22
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
7.34e3
  • 7.34e3
  • 8.26e3
  • 1.21e4
75.44
  • 75.44
  • 72.34
  • 59.59
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
9.25e3
  • 9.25e3
69.03
  • 69.03
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.43
  • 65.43
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
  • 1.50e4
55.16
  • 55.16
  • 49.94
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

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