D. rerio Gene: si:ch211-241d21.5 - ENSDARG00000029859 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000029859
Namesi:ch211-241d21.5
Descriptionsi:ch211-241d21.5 [Source:ZFIN;Acc:ZDB-GENE-081104-194]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
703
  • 703
97.65
  • 97.65
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.41e3
  • 1.41e3
95.30
  • 95.30
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
3.83e3
  • 3.83e3
87.18
  • 87.18
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
5.32e3
  • 5.32e3
  • 5.98e3
82.19
  • 82.19
  • 79.98
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
6.24e3
  • 6.24e3
  • 1.43e4
79.11
  • 79.11
  • 52.24
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
6.66e3
  • 6.66e3
77.70
  • 77.70
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
8.35e3
  • 8.35e3
72.05
  • 72.05
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.05e4
  • 1.05e4
64.74
  • 64.74
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.11
  • 64.11
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.12
  • 62.12
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
60.44
  • 60.44
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.35e4
  • 1.35e4
  • 1.39e4
  • 1.55e4
  • 1.94e4
  • 1.97e4
54.78
  • 54.78
  • 53.48
  • 48.00
  • 35.15
  • 34.17
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.38e4
  • 1.38e4
53.79
  • 53.79
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.54e4
  • 1.54e4
48.38
  • 48.38
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.61e4
  • 1.61e4
  • 1.93e4
46.00
  • 46.00
  • 35.42
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.63e4
  • 1.63e4
45.39
  • 45.39
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.81e4
  • 1.81e4
39.34
  • 39.34
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.03e4
  • 2.03e4
31.98
  • 31.98
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
2.22e4
  • 2.22e4
25.54
  • 25.54
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLCT025742
EnsemblENSDARG00000029859 (si:ch211-241d21.5)
Uniprot/SPTREMBLB8JJJ7, B8JJJ7_DANRE, B8JJJ8, B8JJJ8_DANRE, B8JJJ9, B8JJJ9_DANRE, F1QUJ6, F1QUJ6_DANRE
ZFINZDB-GENE-081104-194 (si:ch211-241d21.5)

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