D. rerio Gene: parpbp - ENSDARG00000029944 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000029944
Nameparpbp
DescriptionPARP1 binding protein [Source:ZFIN;Acc:ZDB-GENE-060421-5714]
OrganismDanio rerio (zebrafish)
Synonym(s)pari, parp1bp, si:ch211-260p3.2, zgc:136263
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
778
  • 778
97.40
  • 97.40
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
789
  • 789
97.36
  • 97.36
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000016Blastula:30%-epiboly
1.07e3
  • 1.07e3
  • 4.37e3
  • 6.82e3
  • 7.54e3
  • 8.53e3
96.42
  • 96.42
  • 85.37
  • 77.18
  • 74.77
  • 71.44
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.40e3
  • 2.40e3
91.96
  • 91.96
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
3.75e3
  • 3.75e3
87.44
  • 87.44
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
3.92e3
  • 3.92e3
  • 1.02e4
  • 1.08e4
  • 1.10e4
  • 1.13e4
  • 1.15e4
  • 1.16e4
  • 1.18e4
  • 1.22e4
  • 1.32e4
  • 1.42e4
  • 1.44e4
  • 1.46e4
  • 1.49e4
  • 1.50e4
86.87
  • 86.87
  • 65.80
  • 63.93
  • 63.01
  • 62.18
  • 61.34
  • 61.10
  • 60.50
  • 59.01
  • 55.91
  • 52.43
  • 51.76
  • 50.98
  • 50.20
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
4.24e3
  • 4.24e3
85.81
  • 85.81
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
4.31e3
  • 4.31e3
85.58
  • 85.58
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
5.73e3
  • 5.73e3
  • 7.00e3
  • 7.65e3
  • 1.14e4
  • 1.15e4
  • 1.21e4
  • 1.22e4
  • 1.26e4
  • 1.37e4
  • 1.59e4
80.83
  • 80.83
  • 76.57
  • 74.39
  • 61.84
  • 61.54
  • 59.59
  • 59.01
  • 57.67
  • 54.21
  • 46.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
5.90e3
  • 5.90e3
80.26
  • 80.26
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
6.56e3
  • 6.56e3
  • 6.65e3
  • 8.44e3
  • 9.13e3
  • 9.41e3
  • 1.18e4
78.03
  • 78.03
  • 77.73
  • 71.75
  • 69.43
  • 68.51
  • 60.54
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
7.99e3
  • 7.99e3
73.25
  • 73.25
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
8.63e3
  • 8.63e3
71.10
  • 71.10
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
8.96e3
  • 8.96e3
  • 1.73e4
70.00
  • 70.00
  • 42.02
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
9.28e3
  • 9.28e3
68.94
  • 68.94
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.31
  • 66.31
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
1.04e4
  • 1.04e4
  • 1.08e4
65.26
  • 65.26
  • 63.70
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.05e4
  • 1.05e4
64.76
  • 64.76
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.04
  • 64.04
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.12e4
  • 1.12e4
62.65
  • 62.65
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.12e4
  • 1.12e4
62.43
  • 62.43
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
1.25e4
  • 1.25e4
58.27
  • 58.27
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.30e4
  • 1.30e4
  • 1.97e4
56.35
  • 56.35
  • 34.13
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
1.30e4
  • 1.30e4
  • 1.49e4
  • 1.61e4
56.31
  • 56.31
  • 50.08
  • 46.24
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
50.24
  • 50.24
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.54e4
  • 1.54e4
48.57
  • 48.57
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.70e4
  • 1.70e4
43.13
  • 43.13
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.74e4
  • 1.74e4
41.86
  • 41.86
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.81e4
  • 1.81e4
39.27
  • 39.27
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.90e4
  • 1.90e4
36.23
  • 36.23
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Cross-references

EnsemblENSDARG00000029944 (parpbp)
ZFINZDB-GENE-060421-5714 (parpbp)
EMBLBX510924
Uniprot/SPTREMBLI7HPA4, I7HPA4_DANRE

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