D. rerio Gene: nfkbib - ENSDARG00000030087 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000030087
Namenfkbib
Descriptionnuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta [Source:ZFIN;Acc:ZDB-GENE-070705-529]
OrganismDanio rerio (zebrafish)
Synonym(s)cb606, sb:cb606, si:dkeyp-110c7.1, si:dkeyp-110c7.1 {eco:0000313|embl:aai63433.1,gn eco:0000313|ensembl:ensdarp00000045035}

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
912
  • 912
96.95
  • 96.95
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
1.09e3
  • 1.09e3
  • 6.22e3
  • 6.97e3
96.36
  • 96.36
  • 79.16
  • 76.66
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.13e3
  • 1.13e3
96.24
  • 96.24
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.14e3
  • 1.14e3
96.19
  • 96.19
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.28e3
  • 1.28e3
95.71
  • 95.71
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.51e3
  • 1.51e3
94.95
  • 94.95
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.56e3
  • 1.56e3
94.77
  • 94.77
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.59e3
  • 1.59e3
  • 3.67e3
94.66
  • 94.66
  • 87.72
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
1.66e3
  • 1.66e3
  • 2.17e3
  • 3.86e3
  • 7.07e3
94.45
  • 94.45
  • 92.75
  • 87.08
  • 76.34
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.73e3
  • 1.73e3
94.20
  • 94.20
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.77e3
  • 1.77e3
94.08
  • 94.08
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.88e3
  • 1.88e3
  • 2.03e3
93.71
  • 93.71
  • 93.20
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
1.89e3
  • 1.89e3
  • 1.91e3
  • 2.88e3
  • 3.02e3
  • 3.21e3
  • 3.23e3
  • 4.23e3
  • 4.26e3
  • 5.18e3
  • 7.31e3
93.67
  • 93.67
  • 93.59
  • 90.35
  • 89.88
  • 89.26
  • 89.19
  • 85.83
  • 85.73
  • 82.66
  • 75.51
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
2.19e3
  • 2.19e3
  • 3.73e3
  • 5.41e3
92.68
  • 92.68
  • 87.53
  • 81.89
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
2.24e3
  • 2.24e3
  • 2.40e3
92.51
  • 92.51
  • 91.97
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
2.36e3
  • 2.36e3
  • 1.50e4
92.10
  • 92.10
  • 49.92
AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
2.68e3
  • 2.68e3
91.04
  • 91.04
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
2.76e3
  • 2.76e3
90.77
  • 90.77
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
2.77e3
  • 2.77e3
  • 3.68e3
  • 3.77e3
  • 3.82e3
  • 4.64e3
  • 4.92e3
  • 5.02e3
  • 5.28e3
  • 5.40e3
  • 5.60e3
  • 5.70e3
  • 6.26e3
  • 6.37e3
  • 7.73e3
  • 1.43e4
  • 1.50e4
  • 1.50e4
90.74
  • 90.74
  • 87.66
  • 87.39
  • 87.21
  • 84.45
  • 83.51
  • 83.21
  • 82.32
  • 81.92
  • 81.26
  • 80.92
  • 79.04
  • 78.67
  • 74.11
  • 51.99
  • 49.92
  • 49.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
3.42e3
  • 3.42e3
88.56
  • 88.56
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
3.60e3
  • 3.60e3
87.94
  • 87.94
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
3.74e3
  • 3.74e3
  • 4.34e3
87.47
  • 87.47
  • 85.48
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
3.75e3
  • 3.75e3
87.46
  • 87.46
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
4.11e3
  • 4.11e3
86.23
  • 86.23
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
4.14e3
  • 4.14e3
  • 6.02e3
  • 7.55e3
  • 7.77e3
  • 7.84e3
  • 9.45e3
86.13
  • 86.13
  • 79.84
  • 74.71
  • 73.98
  • 73.74
  • 68.36
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
4.29e3
  • 4.29e3
85.64
  • 85.64
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
4.85e3
  • 4.85e3
83.75
  • 83.75
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
4.88e3
  • 4.88e3
  • 5.88e3
  • 9.80e3
  • 1.10e4
  • 1.10e4
83.67
  • 83.67
  • 80.33
  • 67.17
  • 63.12
  • 63.11
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
6.59e3
  • 6.59e3
77.93
  • 77.93
AEIR
  • AEIR
UBERON:0000162cloaca
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
7.47e3
  • 7.47e3
  • 7.47e3
74.99
  • 74.99
  • 74.99
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
8.19e3
  • 8.19e3
72.59
  • 72.59
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
8.54e3
  • 8.54e3
  • 8.96e3
  • 9.96e3
  • 1.14e4
  • 1.20e4
  • 1.23e4
  • 1.25e4
  • 1.25e4
71.42
  • 71.42
  • 69.99
  • 66.65
  • 61.88
  • 59.98
  • 58.80
  • 58.31
  • 58.31
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000004nose
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
8.79e3
  • 8.79e3
  • 8.79e3
70.57
  • 70.57
  • 70.57
AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
8.80e3
  • 8.80e3
70.53
  • 70.53
AEIR
  • AEIR
UBERON:0003060pronephric duct
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
1.05e4
  • 1.05e4
  • 1.05e4
  • 1.10e4
64.98
  • 64.98
  • 64.98
  • 63.14
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2000058polster
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
1.16e4
  • 1.16e4
  • 1.16e4
  • 1.20e4
61.09
  • 61.09
  • 61.09
  • 59.98
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBC163433, BX927323
EnsemblENSDARG00000030087 (nfkbib)
Uniprot/SPTREMBLB3DJC4, B3DJC4_DANRE
ZFINZDB-GENE-070705-529 (nfkbib)

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