D. rerio Gene: tmc2b - ENSDARG00000030311 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000030311
Nametmc2b
Descriptiontransmembrane channel-like 2b [Source:ZFIN;Acc:ZDB-GENE-060526-262]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkey-229d2.2, tmc2b

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000856neuromast hair cell
  • ZFS:0000036Larval:Day 4
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.73e4
  • 1.73e4
42.10
  • 42.10
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.78e4
  • 1.78e4
40.53
  • 40.53
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.03e4
  • 2.03e4
31.88
  • 31.88
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
2.06e4
  • 2.06e4
  • 2.09e4
  • 2.22e4
31.13
  • 31.13
  • 29.94
  • 25.58
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
2.21e4
  • 2.21e4
  • 2.29e4
25.90
  • 25.90
  • 23.39
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

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