D. rerio Gene: mnx2b - ENSDARG00000030350 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000030350
Namemnx2b
Descriptionmotor neuron and pancreas homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-040415-2]
OrganismDanio rerio (zebrafish)
Synonym(s)hlxb9lb, mnr2b

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000532CAP motoneuron
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
7.47e3
  • 7.47e3
  • 1.49e4
75.00
  • 75.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
7.56e3
  • 7.56e3
74.68
  • 74.68
AEIR
  • AEIR
ZFA:0005179MiP motor neuron (Danio)
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000027Segmentation:20-25 somites
9.96e3
  • 9.96e3
  • 1.12e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
66.67
  • 66.67
  • 62.50
  • 50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
ZFA:0005180RoP motor neuron (Danio)
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
9.96e3
  • 9.96e3
  • 1.49e4
66.67
  • 66.67
  • 50.00
AEIR
  • AEIR
  • AEIR
ZFA:0005177VeLD (Danio)
  • ZFS:0000029Pharyngula:Prim-5
1.07e4
  • 1.07e4
64.28
  • 64.28
AEIR
  • AEIR
UBERON:2007042spinal cord neural tube
  • ZFS:0000027Segmentation:20-25 somites
1.12e4
  • 1.12e4
62.50
  • 62.50
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
1.17e4
  • 1.17e4
60.78
  • 60.78
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
1.17e4
  • 1.17e4
  • 1.48e4
  • 1.50e4
  • 1.66e4
  • 1.93e4
60.70
  • 60.70
  • 50.39
  • 49.86
  • 44.28
  • 35.40
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • ZFS:0000033Hatching:Long-pec
1.34e4
  • 1.34e4
55.24
  • 55.24
AEIR
  • AEIR
UBERON:0002533post-anal tail bud
  • ZFS:0000027Segmentation:20-25 somites
1.36e4
  • 1.36e4
54.53
  • 54.53
AEIR
  • AEIR
CL:0000100motor neuron
  • ZFS:0000030Pharyngula:Prim-15
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
CL:0000223endodermal cell
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000022Gastrula:Bud
1.49e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
ZFA:0005181VaP motor neuron (Danio)
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
ZFA:0001065lateral mesoderm (Danio)
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000025Segmentation:10-13 somites
1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 49.99
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.66e4
  • 1.66e4
  • 2.02e4
44.47
  • 44.47
  • 32.26
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.29e4
  • 2.29e4
23.49
  • 23.49
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.32e4
  • 2.32e4
22.26
  • 22.26
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLCR762428
EnsemblENSDARG00000030350 (mnx2b)
Uniprot/SPTREMBLA2CEW5, A2CEW5_DANRE, F1RCJ6, F1RCJ6_DANRE
ZFINZDB-GENE-040415-2 (mnx2b)

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