D. rerio Gene: rsrp1 - ENSDARG00000030440 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000030440
Namersrp1
Descriptionarginine/serine-rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-060616-210]
OrganismDanio rerio (zebrafish)
Synonym(s)wu:fc15g08, zgc:136474
Orthologs(s)13 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
242
  • 242
99.19
  • 99.19
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
276
  • 276
  • 896
99.08
  • 99.08
  • 97.00
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000104life cycle
286
  • 286
  • 4.08e3
  • 1.29e4
99.04
  • 99.04
  • 86.33
  • 56.90
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
316
  • 316
98.95
  • 98.95
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
335
  • 335
98.88
  • 98.88
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
338
  • 338
98.87
  • 98.87
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
390
  • 390
98.70
  • 98.70
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
448
  • 448
98.50
  • 98.50
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
458
  • 458
  • 1.30e3
98.47
  • 98.47
  • 95.64
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
458
  • 458
  • 1.65e3
  • 1.66e3
  • 1.74e3
  • 2.25e3
  • 3.23e3
  • 3.50e3
  • 4.45e3
  • 6.91e3
  • 6.98e3
98.47
  • 98.47
  • 94.47
  • 94.46
  • 94.18
  • 92.48
  • 89.17
  • 88.30
  • 85.10
  • 76.87
  • 76.63
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
572
  • 572
98.09
  • 98.09
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
592
  • 592
  • 1.98e3
  • 3.70e3
  • 6.45e3
98.02
  • 98.02
  • 93.36
  • 87.62
  • 78.41
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
612
  • 612
97.95
  • 97.95
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
961
  • 961
96.79
  • 96.79
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.03e3
  • 1.03e3
96.54
  • 96.54
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.08e3
  • 1.08e3
96.39
  • 96.39
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.21e3
  • 1.21e3
95.95
  • 95.95
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.62e3
  • 1.62e3
  • 1.47e4
94.58
  • 94.58
  • 50.88
AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
1.65e3
  • 1.65e3
94.48
  • 94.48
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.96e3
  • 1.96e3
93.44
  • 93.44
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.97e3
  • 1.97e3
  • 6.90e3
93.41
  • 93.41
  • 76.90
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
2.21e3
  • 2.21e3
  • 3.22e3
  • 4.86e3
92.60
  • 92.60
  • 89.21
  • 83.73
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000036Larval:Day 4
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000037Larval:Day 5
  • ZFS:0000042Juvenile:Days 30-44
  • UBERON:0000106zygote stage
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
2.46e3
  • 2.46e3
  • 2.96e3
  • 2.98e3
  • 3.19e3
  • 3.36e3
  • 3.43e3
  • 3.58e3
  • 3.58e3
  • 3.80e3
  • 3.95e3
  • 4.59e3
  • 5.24e3
  • 6.22e3
  • 7.88e3
  • 1.37e4
  • 1.43e4
  • 1.47e4
91.77
  • 91.77
  • 90.10
  • 90.01
  • 89.34
  • 88.74
  • 88.51
  • 88.01
  • 88.00
  • 87.27
  • 86.78
  • 84.64
  • 82.46
  • 79.18
  • 73.62
  • 54.18
  • 52.23
  • 50.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
3.23e3
  • 3.23e3
  • 3.38e3
  • 3.40e3
  • 5.41e3
  • 5.95e3
  • 6.13e3
89.19
  • 89.19
  • 88.67
  • 88.63
  • 81.88
  • 80.08
  • 79.47
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
3.77e3
  • 3.77e3
87.39
  • 87.39
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
3.79e3
  • 3.79e3
  • 5.70e3
  • 6.34e3
  • 6.49e3
  • 6.53e3
87.32
  • 87.32
  • 80.91
  • 78.76
  • 78.27
  • 78.14
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
6.40e3
  • 6.40e3
78.57
  • 78.57
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
6.85e3
  • 6.85e3
77.05
  • 77.05
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
8.02e3
  • 8.02e3
73.16
  • 73.16
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
8.25e3
  • 8.25e3
72.37
  • 72.37
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
8.69e3
  • 8.69e3
70.89
  • 70.89
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Cross-references

EnsemblENSDARG00000030440 (rsrp1)
ZFINZDB-GENE-060616-210 (rsrp1)
EMBLBX465191
Uniprot/SPTREMBLB8A501, B8A501_DANRE, F1RCH3, F1RCH3_DANRE

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