Gene: sppl2 - ENSDARG00000030448 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000030448
Name	sppl2
Description	signal peptide peptidase-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4265]
Organism	Danio rerio (zebrafish)
Synonym(s)	sppl2b, wu:fc16e01, wu:fc85d12, zgc:136525
Orthologs(s)	16 orthologs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0003982	mature ovarian follicle	[+] 1 stage UBERON:0000066fully formed stage	3.46e3 3.46e3	88.40 88.40	AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	3.47e3 3.47e3	88.39 88.39	AEIR AEIR
UBERON:0019248	early embryo	[+] 1 stage UBERON:0000107cleavage stage	4.09e3 4.09e3	86.30 86.30	AEIR AEIR
UBERON:0000468	multi-cellular organism	[+] 7 stages ZFS:0000019Gastrula:Shield ZFS:0000022Gastrula:Bud UBERON:00072368 cell stage ZFS:0000027Segmentation:20-25 somites UBERON:0000068embryo stage UBERON:0000104life cycle UBERON:0000066fully formed stage	4.41e3 4.41e3 6.64e3 6.79e3 6.97e3 1.46e4 1.47e4 1.49e4	85.22 85.22 77.77 77.27 76.66 51.01 50.90 50.25	AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0000307	blastula	[+] 2 stages ZFS:0000015Blastula:Dome ZFS:0000011Blastula:1k-cell	4.83e3 4.83e3 5.65e3	83.83 83.83 81.07	AEIR AEIR AEIR
UBERON:0000033	head	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000066fully formed stage	4.88e3 4.88e3 7.65e3	83.65 83.65 74.39	AEIR AEIR AEIR
UBERON:0002548	larva	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000069larval stage	4.90e3 4.90e3 7.48e3	83.60 83.60 74.96	AEIR AEIR AEIR
UBERON:0000922	embryo	[+] 5 stages ZFS:0000037Larval:Day 5 ZFS:0000029Pharyngula:Prim-5 UBERON:0004707pharyngula stage ZFS:0000033Hatching:Long-pec UBERON:0000068embryo stage	5.05e3 5.05e3 6.33e3 7.78e3 8.13e3 9.44e3	83.09 83.09 78.81 73.94 72.77 68.38	AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0001630	muscle organ	[+] 1 stage UBERON:0000066fully formed stage	5.20e3 5.20e3	82.59 82.59	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	5.74e3 5.74e3	80.79 80.79	AEIR AEIR
UBERON:0000948	heart	[+] 2 stages ZFS:0000036Larval:Day 4 UBERON:0000066fully formed stage	5.74e3 5.74e3 5.76e3	80.77 80.77 80.71	AEIR AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	5.85e3 5.85e3	80.41 80.41	AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	7.03e3 7.03e3	76.48 76.48	AEIR AEIR
UBERON:0004734	gastrula	[+] 2 stages ZFS:0000019Gastrula:Shield ZFS:0000022Gastrula:Bud	7.33e3 7.33e3 8.61e3	75.45 75.45 71.18	AEIR AEIR AEIR
UBERON:0000966	retina	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000066fully formed stage	7.40e3 7.40e3 1.46e4	75.24 75.24 51.07	AEIR AEIR AEIR
UBERON:0000970	eye	[+] 1 stage ZFS:0000031Pharyngula:Prim-25	7.98e3 7.98e3	73.29 73.29	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	8.05e3 8.05e3	73.05 73.05	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	8.08e3 8.08e3	72.95 72.95	AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	8.13e3 8.13e3	72.79 72.79	AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000066fully formed stage	8.18e3 8.18e3	72.62 72.62	AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000066fully formed stage	8.74e3 8.74e3	70.75 70.75	AEIR AEIR
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	9.88e3 9.88e3	66.93 66.93	AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	9.92e3 9.92e3	66.78 66.78	AEIR AEIR
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	1.30e4 1.30e4	56.49 56.49	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

EST data: Bgee
In situ hybridization data: ZFIN
RNA-Seq data: Bgee

Sources of raw data:

EST data: UniGene
In situ hybridization data: ZFIN
RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Euteleostomi	16 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Monodelphis domestica (opossum) Ornithorhynchus anatinus (platypus) Gallus gallus (chicken) Xenopus tropicalis (western clawed frog)	16 genes ENSG00000005206 SPPL2B ENSMUSG00000035206 Sppl2b ENSPTRG00000010234 SPPL2B ENSGGOG00000010177 SPPL2B ENSMMUG00000000453 SPPL2B ENSRNOG00000057881 Sppl2b ENSBTAG00000004524 SPPL2B ENSSSCG00000013464 SPPL2B ENSECAG00000014603 SPPL2B ENSCAFG00000019406 SPPL2B ENSFCAG00000003449 SPPL2B ENSCPOG00000026275 SPPL2B ENSMODG00000004756 SPPL2B ENSOANG00000009197 SPPL2B ENSGALG00000000430 SPPL2B ENSXETG00000001791 sppl2b	Compare expression	[+]

Orthology information comes from OMA : ENSDARG00000030448.

Cross-references

Ensembl	ENSDARG00000030448 (sppl2)
ZFIN	ZDB-GENE-030131-4265 (sppl2)
EMBL	BX539340
Uniprot/SPTREMBL	F1QQ32, F1QQ32_DANRE, F1QYI0, F1QYI0_DANRE