Gene: slc16a5a - ENSDARG00000030472 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000030472
Name	slc16a5a
Description	solute carrier family 16 (monocarboxylate transporter), member 5a [Source:ZFIN;Acc:ZDB-GENE-121108-4]
Organism	Danio rerio (zebrafish)
Synonym(s)	slc16a5
Orthologs(s)	16 orthologs
Paralog(s)	19 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	4.15e3 4.15e3	86.11 86.11	AEIR AEIR
UBERON:0000033	head	[+] 2 stages UBERON:0000066fully formed stage ZFS:0000037Larval:Day 5	7.45e3 7.45e3 1.93e4	75.05 75.05 35.29	AEIR AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	8.55e3 8.55e3	71.36 71.36	AEIR AEIR
UBERON:0001630	muscle organ	[+] 1 stage UBERON:0000066fully formed stage	8.76e3 8.76e3	70.68 70.68	AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000066fully formed stage	9.65e3 9.65e3	67.68 67.68	AEIR AEIR
UBERON:0003982	mature ovarian follicle	[+] 1 stage UBERON:0000066fully formed stage	1.14e4 1.14e4	61.82 61.82	AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	1.15e4 1.15e4	61.48 61.48	AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	1.17e4 1.17e4	60.69 60.69	AEIR AEIR
UBERON:0000948	heart	[+] 2 stages ZFS:0000036Larval:Day 4 UBERON:0000066fully formed stage	1.29e4 1.29e4 1.30e4	56.82 56.82 56.52	AEIR AEIR AEIR
CL:0000094	granulocyte	[+] 1 stage UBERON:0000066fully formed stage	1.39e4 1.39e4	53.38 53.38	AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	1.41e4 1.41e4	52.68 52.68	AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000066fully formed stage	1.43e4 1.43e4	52.28 52.28	AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	1.47e4 1.47e4	50.85 50.85	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	1.52e4 1.52e4	49.11 49.11	AEIR AEIR
UBERON:0000307	blastula	[+] 1 stage ZFS:0000011Blastula:1k-cell	1.57e4 1.57e4	47.47 47.47	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	1.60e4 1.60e4	46.47 46.47	AEIR AEIR
UBERON:0000922	embryo	[+] 5 stages UBERON:0000068embryo stage ZFS:0000029Pharyngula:Prim-5 UBERON:0004707pharyngula stage ZFS:0000033Hatching:Long-pec ZFS:0000037Larval:Day 5	1.61e4 1.61e4 1.67e4 1.71e4 1.71e4 1.76e4	46.15 46.15 44.03 42.85 42.81 40.95	AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	1.64e4 1.64e4	45.02 45.02	AEIR AEIR
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	1.65e4 1.65e4	44.66 44.66	AEIR AEIR
UBERON:0004734	gastrula	[+] 1 stage ZFS:0000022Gastrula:Bud	1.69e4 1.69e4	43.29 43.29	AEIR AEIR
UBERON:0019248	early embryo	[+] 1 stage UBERON:0000107cleavage stage	1.71e4 1.71e4	42.81 42.81	AEIR AEIR
UBERON:0002548	larva	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000069larval stage	1.82e4 1.82e4 1.92e4	38.93 38.93 35.69	AEIR AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000066fully formed stage	1.91e4 1.91e4	36.00 36.00	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Euteleostomi	16 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Monodelphis domestica (opossum) Gallus gallus (chicken) Anolis carolinensis (green anole) Xenopus tropicalis (western clawed frog)	16 genes ENSG00000170190 SLC16A5 ENSMUSG00000045775 Slc16a5 ENSPTRG00000009630 SLC16A5 ENSGGOG00000024914 SLC16A5 ENSRNOG00000023476 Slc16a5 ENSBTAG00000001110 SLC16A5 ENSSSCG00000017215 SLC16A5 ENSECAG00000021415 SLC16A5 ENSOCUG00000016231 SLC16A5 ENSCAFG00000004718 SLC16A5 ENSFCAG00000014507 SLC16A5 ENSCPOG00000004024 SLC16A5 ENSMODG00000007170 SLC16A5 ENSGALG00000007955 SLC16A5 ENSACAG00000006160 SLC16A5 ENSXETG00000012500 slc16a5	Compare expression	[+]

Orthology information comes from OMA : ENSDARG00000030472.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Euteleostomi	1 gene ENSDARG00000102668 slc16a5b	Compare expression	[+]
Opisthokonta	19 genes ENSDARG00000013775 si:dkey-246g23.4 ENSDARG00000013926 slc16a9a ENSDARG00000016963 slc16a1a ENSDARG00000017773 slc16a12a ENSDARG00000020984 slc16a10 ENSDARG00000021573 slc16a7 ENSDARG00000028583 SLC16A3 (1 to many) ENSDARG00000045051 slc16a3 ENSDARG00000045153 slc16a8 ENSDARG00000052109 zgc:114041 ENSDARG00000055342 SLC16A13 ENSDARG00000060246 slc16a6b ENSDARG00000068572 slc16a1b ENSDARG00000089885 slc16a12b ENSDARG00000098258 SLC16A7 ENSDARG00000102668 slc16a5b ENSDARG00000102793 slc16a6a ENSDARG00000104629 SLC16A6 (1 to many) ENSDARG00000104687 slc16a9b	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000030472.

Cross-references

Ensembl	ENSDARG00000030472 (slc16a5a)
ZFIN	ZDB-GENE-121108-4 (slc16a5a)
EMBL	BX470098
Uniprot/SPTREMBL	E7FB53, E7FB53_DANRE