D. rerio Gene: zgc:66484 - ENSDARG00000030478 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000030478
Namezgc:66484
Descriptionzgc:66484 [Source:ZFIN;Acc:ZDB-GENE-030131-5768]
OrganismDanio rerio (zebrafish)
Synonym(s)fi17d03, wu:fi17d03

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
746
  • 746
97.51
  • 97.51
AEIR
  • AEIR
UBERON:0001042chordate pharynx
  • ZFS:0000037Larval:Day 5
5.97e3
  • 5.97e3
80.00
  • 80.00
AEIR
  • AEIR
UBERON:2001076intestinal bulb
  • ZFS:0000037Larval:Day 5
5.97e3
  • 5.97e3
80.00
  • 80.00
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
6.03e3
  • 6.03e3
79.82
  • 79.82
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
6.53e3
  • 6.53e3
  • 1.03e4
  • 1.12e4
78.15
  • 78.15
  • 65.49
  • 62.60
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • UBERON:0000106zygote stage
  • UBERON:0000066fully formed stage
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
6.57e3
  • 6.57e3
  • 8.60e3
  • 8.94e3
  • 1.21e4
  • 1.29e4
  • 1.41e4
  • 1.44e4
  • 1.44e4
  • 1.44e4
  • 1.44e4
  • 1.45e4
  • 1.48e4
  • 1.50e4
  • 1.50e4
  • 1.52e4
78.01
  • 78.01
  • 71.22
  • 70.07
  • 59.52
  • 56.76
  • 52.87
  • 51.89
  • 51.86
  • 51.80
  • 51.67
  • 51.45
  • 50.43
  • 49.93
  • 49.80
  • 49.07
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.93e3
  • 6.93e3
76.81
  • 76.81
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
7.57e3
  • 7.57e3
  • 1.50e4
74.64
  • 74.64
  • 49.89
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000025Segmentation:10-13 somites
8.75e3
  • 8.75e3
  • 1.46e4
  • 1.55e4
  • 1.56e4
  • 1.58e4
  • 1.61e4
  • 1.69e4
  • 1.78e4
70.72
  • 70.72
  • 51.15
  • 48.00
  • 47.85
  • 47.02
  • 46.04
  • 43.31
  • 40.40
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
9.07e3
  • 9.07e3
69.64
  • 69.64
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
9.32e3
  • 9.32e3
  • 1.06e4
  • 1.07e4
  • 1.23e4
  • 1.44e4
68.81
  • 68.81
  • 64.45
  • 64.16
  • 58.96
  • 51.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
9.73e3
  • 9.73e3
67.43
  • 67.43
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
1.01e4
  • 1.01e4
  • 1.36e4
  • 1.41e4
66.04
  • 66.04
  • 54.60
  • 52.67
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.79
  • 65.79
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.50
  • 63.50
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.10e4
  • 1.10e4
63.31
  • 63.31
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.12e4
  • 1.12e4
  • 1.61e4
62.47
  • 62.47
  • 46.13
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.21
  • 62.21
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
1.14e4
  • 1.14e4
  • 1.20e4
  • 1.25e4
  • 1.25e4
  • 1.25e4
  • 1.27e4
  • 1.29e4
  • 1.29e4
  • 1.29e4
  • 1.41e4
61.88
  • 61.88
  • 59.98
  • 58.31
  • 58.31
  • 58.31
  • 57.47
  • 56.65
  • 56.65
  • 56.65
  • 52.75
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.14e4
  • 1.14e4
61.71
  • 61.71
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.31
  • 61.31
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.16e4
  • 1.16e4
61.02
  • 61.02
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.19e4
  • 1.19e4
  • 1.20e4
60.13
  • 60.13
  • 59.89
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.21e4
  • 1.21e4
  • 1.48e4
59.48
  • 59.48
  • 50.47
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.24e4
  • 1.24e4
58.54
  • 58.54
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.89
  • 57.89
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
57.04
  • 57.04
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.31e4
  • 1.31e4
  • 1.52e4
56.05
  • 56.05
  • 49.15
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.39e4
  • 1.39e4
  • 1.45e4
  • 1.72e4
53.36
  • 53.36
  • 51.44
  • 42.46
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBX571855
EnsemblENSDARG00000030478 (zgc:66484)
Uniprot/SPTREMBLE9QBJ1, E9QBJ1_DANRE, F1Q7C3, F1Q7C3_DANRE
ZFINZDB-GENE-030131-5768 (zgc:66484)

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