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D. rerio Gene: CCDC134 (1 to many) - ENSDARG00000030508 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000030508
NameCCDC134 (1 to many)
Descriptionsi:dkey-167k11.5 [Source:ZFIN;Acc:ZDB-GENE-091204-218]
OrganismDanio rerio (zebrafish)
Synonym(s)flj22349
Orthologs(s)18 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
2.89e3
  • 2.89e3
  • 4.19e3
90.32
  • 90.32
  • 85.97
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
3.10e3
  • 3.10e3
89.63
  • 89.63
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
3.42e3
  • 3.42e3
  • 5.16e3
88.55
  • 88.55
  • 82.72
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
3.44e3
  • 3.44e3
88.49
  • 88.49
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
4.27e3
  • 4.27e3
  • 8.03e3
  • 8.62e3
  • 9.48e3
  • 9.56e3
85.69
  • 85.69
  • 73.11
  • 71.15
  • 68.26
  • 67.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
5.71e3
  • 5.71e3
80.87
  • 80.87
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
5.94e3
  • 5.94e3
80.10
  • 80.10
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
6.06e3
  • 6.06e3
79.72
  • 79.72
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.50e3
  • 6.50e3
78.23
  • 78.23
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
7.21e3
  • 7.21e3
75.87
  • 75.87
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
7.26e3
  • 7.26e3
  • 1.32e4
75.68
  • 75.68
  • 55.91
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
8.52e3
  • 8.52e3
  • 1.24e4
71.48
  • 71.48
  • 58.58
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
9.09e3
  • 9.09e3
69.56
  • 69.56
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
9.57e3
  • 9.57e3
67.96
  • 67.96
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.05
  • 66.05
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
  • 1.22e4
62.94
  • 62.94
  • 59.28
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.21
  • 61.21
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.45e4
  • 1.45e4
51.38
  • 51.38
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.53e4
  • 1.53e4
48.81
  • 48.81
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.73e4
  • 1.73e4
42.20
  • 42.20
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.79e4
  • 1.79e4
40.04
  • 40.04
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.89e4
  • 1.89e4
36.68
  • 36.68
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi17 species17 genesCompare expression
Bilateria18 species18 genesCompare expression

Orthology information comes from OMA : ENSDARG00000030508.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Otophysi1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000030508.

Cross-references

EnsemblENSDARG00000030508 (CCDC134 (1 to many))
HGNCHGNC:26185 (CCDC134 (1 to many))
ZFINZDB-GENE-091204-218 (si:dkey-167k11.5)
EMBLCU394254
Uniprot/SPTREMBLE9QFY7, E9QFY7_DANRE, H9GXT8, H9GXT8_DANRE

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