D. rerio Gene: ARHGEF12 (1 to many) - ENSDARG00000030532 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000030532
NameARHGEF12 (1 to many)
DescriptionRho guanine nucleotide exchange factor 12 [Source:HGNC Symbol;Acc:HGNC:14193]
OrganismDanio rerio (zebrafish)
Synonym(s)kiaa0382, larg

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
3.77e3
  • 3.77e3
87.38
  • 87.38
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
4.41e3
  • 4.41e3
85.23
  • 85.23
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
4.82e3
  • 4.82e3
  • 7.73e3
  • 8.07e3
  • 8.48e3
  • 8.62e3
  • 9.11e3
83.87
  • 83.87
  • 74.13
  • 72.99
  • 71.60
  • 71.14
  • 69.49
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
5.18e3
  • 5.18e3
82.64
  • 82.64
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000016Blastula:30%-epiboly
5.36e3
  • 5.36e3
  • 6.65e3
  • 8.16e3
  • 8.36e3
  • 8.94e3
82.04
  • 82.04
  • 77.73
  • 72.69
  • 72.01
  • 70.08
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
5.40e3
  • 5.40e3
  • 9.21e3
81.92
  • 81.92
  • 69.17
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
5.49e3
  • 5.49e3
81.61
  • 81.61
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.51e3
  • 5.51e3
81.55
  • 81.55
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.82e3
  • 5.82e3
80.52
  • 80.52
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
6.19e3
  • 6.19e3
  • 6.84e3
  • 7.56e3
  • 9.15e3
  • 9.19e3
  • 9.28e3
  • 9.37e3
  • 1.06e4
  • 1.10e4
  • 1.14e4
79.29
  • 79.29
  • 77.08
  • 74.70
  • 69.35
  • 69.23
  • 68.91
  • 68.64
  • 64.48
  • 63.12
  • 61.94
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
6.45e3
  • 6.45e3
78.41
  • 78.41
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
7.14e3
  • 7.14e3
  • 8.48e3
  • 9.42e3
  • 1.07e4
76.11
  • 76.11
  • 71.61
  • 68.45
  • 64.11
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
7.48e3
  • 7.48e3
  • 7.49e3
74.97
  • 74.97
  • 74.93
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
7.65e3
  • 7.65e3
74.39
  • 74.39
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000106zygote stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
8.00e3
  • 8.00e3
  • 8.38e3
  • 8.48e3
  • 8.70e3
  • 8.75e3
  • 9.30e3
  • 1.01e4
  • 1.04e4
  • 1.07e4
  • 1.08e4
  • 1.09e4
  • 1.11e4
  • 1.13e4
  • 1.14e4
73.20
  • 73.20
  • 71.95
  • 71.62
  • 70.86
  • 70.71
  • 68.86
  • 66.06
  • 65.26
  • 64.20
  • 63.95
  • 63.40
  • 62.81
  • 62.32
  • 61.94
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
8.24e3
  • 8.24e3
72.42
  • 72.42
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
8.25e3
  • 8.25e3
72.39
  • 72.39
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
8.32e3
  • 8.32e3
72.13
  • 72.13
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
8.37e3
  • 8.37e3
71.97
  • 71.97
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
8.58e3
  • 8.58e3
71.28
  • 71.28
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.22e3
  • 9.22e3
69.13
  • 69.13
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
9.53e3
  • 9.53e3
68.10
  • 68.10
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
9.70e3
  • 9.70e3
67.53
  • 67.53
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
9.87e3
  • 9.87e3
  • 1.10e4
  • 1.20e4
66.97
  • 66.97
  • 63.09
  • 59.89
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.16
  • 66.16
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.03e4
  • 1.03e4
65.52
  • 65.52
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.11e4
  • 1.11e4
  • 1.25e4
62.68
  • 62.68
  • 58.02
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
62.44
  • 62.44
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
59.84
  • 59.84
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
50.10
  • 50.10
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLCR457443
EnsemblENSDARG00000030532 (ARHGEF12 (1 to many))
HGNCHGNC:14193 (ARHGEF12 (1 to many))
Uniprot/SPTREMBLE7FDV8, E7FDV8_DANRE

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