D. rerio Gene: nfe2l1a - ENSDARG00000030616 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000030616
Namenfe2l1a
Descriptionnuclear factor, erythroid 2-like 1a [Source:ZFIN;Acc:ZDB-GENE-040630-5]
OrganismDanio rerio (zebrafish)
Synonym(s)nfe2l1, nfe2l1 {eco:0000313|embl:aai62497.1,gn eco:0000313|zfin:zdb-gene-040630-5}, nrf1a

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.60e3
  • 1.60e3
94.63
  • 94.63
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
5.77e3
  • 5.77e3
  • 9.96e3
  • 1.17e4
  • 1.22e4
  • 1.22e4
  • 1.24e4
80.67
  • 80.67
  • 66.65
  • 60.70
  • 59.08
  • 59.08
  • 58.32
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
5.79e3
  • 5.79e3
  • 1.69e4
  • 1.80e4
  • 1.81e4
  • 1.98e4
80.61
  • 80.61
  • 43.34
  • 39.68
  • 39.25
  • 33.55
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
6.22e3
  • 6.22e3
79.19
  • 79.19
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
6.53e3
  • 6.53e3
  • 9.38e3
78.15
  • 78.15
  • 68.59
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
8.96e3
  • 8.96e3
69.99
  • 69.99
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
9.75e3
  • 9.75e3
  • 1.82e4
67.35
  • 67.35
  • 39.14
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.33
  • 66.33
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.16
  • 64.16
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.84
  • 63.84
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
62.65
  • 62.65
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.14e4
  • 1.14e4
61.98
  • 61.98
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.19
  • 61.19
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.21e4
  • 1.21e4
59.39
  • 59.39
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
55.87
  • 55.87
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
55.74
  • 55.74
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
1.39e4
  • 1.39e4
  • 1.52e4
53.48
  • 53.48
  • 49.21
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.44e4
  • 1.44e4
  • 1.60e4
51.78
  • 51.78
  • 46.54
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
50.46
  • 50.46
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
47.04
  • 47.04
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.63e4
  • 1.63e4
45.47
  • 45.47
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.70e4
  • 1.70e4
42.96
  • 42.96
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.74e4
  • 1.74e4
41.88
  • 41.88
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

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