D. rerio Gene: th - ENSDARG00000030621 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000030621
Nameth
Descriptiontyrosine hydroxylase [Source:ZFIN;Acc:ZDB-GENE-990621-5]
OrganismDanio rerio (zebrafish)
Synonym(s)th1
Orthologs(s)13 orthologs
Paralog(s)5 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001894diencephalon
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000036Larval:Day 4
  • ZFS:0000039Larval:Days 7-13
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000037Larval:Day 5
1.36e3
  • 1.36e3
  • 4.98e3
  • 4.98e3
  • 7.47e3
  • 7.47e3
  • 8.30e3
  • 1.04e4
  • 1.22e4
  • 1.36e4
  • 1.41e4
  • 1.49e4
  • 1.49e4
95.46
  • 95.46
  • 83.34
  • 83.34
  • 75.00
  • 74.98
  • 72.21
  • 65.19
  • 59.06
  • 54.32
  • 52.92
  • 50.00
  • 49.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2000633caudal tuberculum
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000036Larval:Day 4
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
1.66e3
  • 1.66e3
  • 2.99e3
  • 2.99e3
  • 2.99e3
  • 4.98e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 9.96e3
94.45
  • 94.45
  • 90.00
  • 90.00
  • 90.00
  • 83.34
  • 75.00
  • 75.00
  • 75.00
  • 66.67
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001900ventral thalamus
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
2.99e3
  • 2.99e3
  • 7.47e3
  • 1.49e4
90.00
  • 90.00
  • 75.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001989superior cervical ganglion
  • ZFS:0000036Larval:Day 4
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000033Hatching:Long-pec
2.99e3
  • 2.99e3
  • 3.73e3
  • 9.96e3
90.00
  • 90.00
  • 87.50
  • 66.67
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002148locus ceruleus
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000039Larval:Days 7-13
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
2.99e3
  • 2.99e3
  • 4.98e3
  • 4.98e3
  • 7.47e3
  • 7.47e3
  • 1.49e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
90.00
  • 90.00
  • 83.34
  • 83.34
  • 75.00
  • 75.00
  • 50.00
  • 50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000039Larval:Days 7-13
3.73e3
  • 3.73e3
  • 4.98e3
  • 7.47e3
  • 1.49e4
  • 1.49e4
87.50
  • 87.50
  • 83.34
  • 75.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000036Larval:Day 4
  • ZFS:0000039Larval:Days 7-13
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
3.73e3
  • 3.73e3
  • 3.73e3
  • 1.49e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
87.50
  • 87.50
  • 87.50
  • 50.00
  • 50.00
  • 50.00
  • 49.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000036Larval:Day 4
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
3.98e3
  • 3.98e3
  • 5.97e3
  • 7.97e3
  • 7.97e3
  • 8.53e3
  • 8.71e3
  • 9.96e3
  • 9.96e3
  • 1.08e4
86.66
  • 86.66
  • 80.00
  • 73.32
  • 73.32
  • 71.43
  • 70.82
  • 66.67
  • 66.65
  • 63.87
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000561amacrine cell
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000034Hatching:Pec-fin
4.98e3
  • 4.98e3
  • 7.47e3
  • 1.49e4
  • 1.49e4
83.34
  • 83.34
  • 75.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000700dopaminergic neuron
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
4.98e3
  • 4.98e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 1.49e4
83.34
  • 83.34
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001928preoptic area
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
4.98e3
  • 4.98e3
  • 1.05e4
  • 1.24e4
83.34
  • 83.34
  • 64.99
  • 58.33
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001944pretectal region
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000039Larval:Days 7-13
  • ZFS:0000033Hatching:Long-pec
4.98e3
  • 4.98e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 1.49e4
  • 1.49e4
  • 1.49e4
83.34
  • 83.34
  • 75.00
  • 75.00
  • 75.00
  • 50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
5.62e3
  • 5.62e3
  • 1.12e4
  • 1.63e4
81.17
  • 81.17
  • 62.50
  • 45.40
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001893telencephalon
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000039Larval:Days 7-13
6.40e3
  • 6.40e3
  • 7.47e3
  • 7.47e3
  • 1.12e4
  • 1.42e4
  • 1.42e4
  • 1.49e4
78.57
  • 78.57
  • 75.00
  • 75.00
  • 62.49
  • 52.60
  • 52.60
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000204ventral part of telencephalon
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
7.47e3
  • 7.47e3
  • 7.47e3
75.00
  • 75.00
  • 75.00
AEIR
  • AEIR
  • AEIR
UBERON:0001925ventral lateral nucleus of thalamus
  • ZFS:0000042Juvenile:Days 30-44
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0002037cerebellum
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000030Pharyngula:Prim-15
7.47e3
  • 7.47e3
  • 1.20e4
75.00
  • 75.00
  • 59.98
AEIR
  • AEIR
  • AEIR
UBERON:0002028hindbrain
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
7.47e3
  • 7.47e3
  • 1.28e4
  • 1.34e4
  • 1.34e4
  • 1.49e4
75.00
  • 75.00
  • 57.11
  • 54.97
  • 54.97
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002034suprachiasmatic nucleus
  • ZFS:0000042Juvenile:Days 30-44
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:2000482caudal tuberal nucleus
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000033Hatching:Long-pec
7.47e3
  • 7.47e3
  • 1.49e4
75.00
  • 75.00
  • 50.00
AEIR
  • AEIR
  • AEIR
ZFA:0000634caudal hypothalamic zone (Danio)
  • ZFS:0000035Larval:Protruding-mouth
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
7.47e3
  • 7.47e3
  • 7.47e3
  • 8.54e3
  • 9.96e3
  • 1.34e4
  • 1.36e4
  • 1.49e4
75.00
  • 75.00
  • 75.00
  • 71.42
  • 66.67
  • 54.99
  • 54.53
  • 49.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
9.56e3
  • 9.56e3
  • 1.13e4
67.98
  • 67.98
  • 62.04
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
9.87e3
  • 9.87e3
66.95
  • 66.95
AEIR
  • AEIR
UBERON:2000248magnocellular preoptic nucleus
  • ZFS:0000042Juvenile:Days 30-44
9.96e3
  • 9.96e3
66.67
  • 66.67
AEIR
  • AEIR
UBERON:2000475paraventricular organ
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
9.96e3
  • 9.96e3
  • 1.49e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
66.67
  • 66.67
  • 50.00
  • 50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2000630caudal parvocellular preoptic nucleus
  • ZFS:0000042Juvenile:Days 30-44
9.96e3
  • 9.96e3
66.67
  • 66.67
AEIR
  • AEIR
UBERON:0002539pharyngeal arch
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
1.03e4
  • 1.03e4
  • 1.16e4
  • 1.21e4
  • 1.22e4
65.61
  • 65.61
  • 61.09
  • 59.36
  • 59.08
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
59.88
  • 59.88
AEIR
  • AEIR
UBERON:0001891midbrain
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
1.25e4
  • 1.25e4
  • 1.49e4
  • 1.49e4
58.31
  • 58.31
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
1.33e4
  • 1.33e4
  • 1.51e4
  • 1.53e4
  • 1.68e4
  • 1.73e4
  • 1.78e4
55.32
  • 55.32
  • 49.33
  • 48.78
  • 43.88
  • 41.97
  • 40.54
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
ZFA:0005777sympathetic neuron (Danio)
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
1.49e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2000449torus longitudinalis
  • ZFS:0000042Juvenile:Days 30-44
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:2000324caudal periventricular hypothalamus
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000033Hatching:Long-pec
1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:2000426rostral parvocellular preoptic nucleus
  • ZFS:0000042Juvenile:Days 30-44
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0002162area postrema
  • ZFS:0000036Larval:Day 4
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:2000199dorsal periventricular hypothalamus
  • ZFS:0000033Hatching:Long-pec
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:2000388medial caudal lobe
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • ZFS:0000039Larval:Days 7-13
1.49e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2000392median tuberal portion
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000035Larval:Protruding-mouth
1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:2000408periventricular nucleus of caudal tuberculum
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:2005341medial longitudinal catecholaminergic tract
  • ZFS:0000035Larval:Protruding-mouth
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
ZFA:0005342anterior catecholaminergic tract (Danio)
  • ZFS:0000035Larval:Protruding-mouth
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
CL:0000166chromaffin cell
  • ZFS:0000036Larval:Day 4
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:2005340nucleus of the posterior recess
  • ZFS:0000042Juvenile:Days 30-44
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
1.59e4
  • 1.59e4
  • 1.69e4
  • 1.73e4
46.79
  • 46.79
  • 43.47
  • 42.15
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
1.68e4
  • 1.68e4
43.76
  • 43.76
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.74e4
  • 1.74e4
41.60
  • 41.60
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eukaryota5 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000030621.

Cross-references

Do not show this banner again