D. rerio Gene: guca1c - ENSDARG00000030758 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000030758
Nameguca1c
Descriptionguanylate cyclase activator 1C [Source:ZFIN;Acc:ZDB-GENE-030829-1]
OrganismDanio rerio (zebrafish)
Synonym(s)gcap3
Paralog(s)49 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
267
  • 267
  • 1.65e3
99.11
  • 99.11
  • 94.46
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
546
  • 546
  • 1.40e3
98.18
  • 98.18
  • 95.32
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
6.17e3
  • 6.17e3
  • 2.15e4
  • 2.28e4
  • 2.31e4
79.35
  • 79.35
  • 28.14
  • 23.76
  • 22.67
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001787photoreceptor layer of retina
  • ZFS:0000037Larval:Day 5
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0000941cranial nerve II
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
8.96e3
  • 8.96e3
  • 1.49e4
70.00
  • 70.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
9.44e3
  • 9.44e3
  • 1.17e4
  • 1.62e4
68.41
  • 68.41
  • 60.77
  • 45.83
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001789outer nuclear layer of retina
  • ZFS:0000035Larval:Protruding-mouth
1.07e4
  • 1.07e4
64.28
  • 64.28
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
1.37e4
  • 1.37e4
  • 1.46e4
  • 1.50e4
  • 1.51e4
  • 1.66e4
  • 1.79e4
  • 1.81e4
  • 1.83e4
54.26
  • 54.26
  • 51.12
  • 49.92
  • 49.33
  • 44.35
  • 40.18
  • 39.42
  • 38.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000029Pharyngula:Prim-5
1.41e4
  • 1.41e4
52.75
  • 52.75
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.77
  • 40.77
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.94e4
  • 1.94e4
35.15
  • 35.15
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.94e4
  • 1.94e4
34.88
  • 34.88
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.98e4
  • 1.98e4
  • 2.02e4
33.76
  • 33.76
  • 32.21
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.16e4
  • 2.16e4
27.60
  • 27.60
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.18e4
  • 2.18e4
27.07
  • 27.07
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Paralogs (same species)

Cross-references

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