Gene: tescb - ENSDARG00000030839 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000030839
Name	tescb
Description	tescalcin b [Source:ZFIN;Acc:ZDB-GENE-040426-1903]
Organism	Danio rerio (zebrafish)
Synonym(s)	zgc:77891
Orthologs(s)	18 orthologs
Paralog(s)	1 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000473	testis	[+] 1 stage UBERON:0000066fully formed stage	5.86e3 5.86e3	80.39 80.39	AEIR AEIR
CL:0000094	granulocyte	[+] 1 stage UBERON:0000066fully formed stage	5.96e3 5.96e3	80.06 80.06	AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	6.78e3 6.78e3	77.29 77.29	AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	7.51e3 7.51e3	74.85 74.85	AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000066fully formed stage	7.61e3 7.61e3	74.51 74.51	AEIR AEIR
UBERON:0000307	blastula	[+] 2 stages ZFS:0000011Blastula:1k-cell ZFS:0000015Blastula:Dome	7.77e3 7.77e3 1.40e4	73.99 73.99 53.12	AEIR AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	7.97e3 7.97e3	73.33 73.33	AEIR AEIR
UBERON:0000922	embryo	[+] 5 stages ZFS:0000029Pharyngula:Prim-5 UBERON:0004707pharyngula stage ZFS:0000037Larval:Day 5 UBERON:0000068embryo stage ZFS:0000033Hatching:Long-pec	8.27e3 8.27e3 1.02e4 1.17e4 1.27e4 1.63e4	72.30 72.30 65.71 60.86 57.52 45.55	AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000066fully formed stage	8.36e3 8.36e3	72.00 72.00	AEIR AEIR
UBERON:0000033	head	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000066fully formed stage	8.56e3 8.56e3 1.14e4	71.34 71.34 61.99	AEIR AEIR AEIR
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	9.55e3 9.55e3	68.04 68.04	AEIR AEIR
UBERON:0019248	early embryo	[+] 1 stage UBERON:0000107cleavage stage	9.63e3 9.63e3	67.77 67.77	AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	1.01e4 1.01e4	66.34 66.34	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	1.01e4 1.01e4	66.30 66.30	AEIR AEIR
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	1.05e4 1.05e4	64.97 64.97	AEIR AEIR
UBERON:0002548	larva	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000069larval stage	1.45e4 1.45e4 1.64e4	51.47 51.47 45.24	AEIR AEIR AEIR
UBERON:0000970	eye	[+] 1 stage ZFS:0000031Pharyngula:Prim-25	1.46e4 1.46e4	51.14 51.14	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	1.47e4 1.47e4	50.94 50.94	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	1.47e4 1.47e4	50.62 50.62	AEIR AEIR
UBERON:0004734	gastrula	[+] 1 stage ZFS:0000019Gastrula:Shield	1.51e4 1.51e4	49.56 49.56	AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	1.52e4 1.52e4	49.02 49.02	AEIR AEIR
UBERON:0000948	heart	[+] 1 stage UBERON:0000066fully formed stage	1.61e4 1.61e4	45.94 45.94	AEIR AEIR
UBERON:0001630	muscle organ	[+] 1 stage UBERON:0000066fully formed stage	1.77e4 1.77e4	40.65 40.65	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Euteleostomi	17 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Ornithorhynchus anatinus (platypus) Gallus gallus (chicken) Anolis carolinensis (green anole) Xenopus tropicalis (western clawed frog)	18 genes ENSG00000088992 TESC ENSMUSG00000029359 Tesc ENSPTRG00000005504 TESC ENSGGOG00000002737 TESC ENSMMUG00000017478 TESC ENSRNOG00000001128 Tesc ENSBTAG00000044078 TESC ENSSSCG00000009859 TESC ENSECAG00000011177 TESC ENSOCUG00000022753 ENSOCUG00000027997 TESC ENSCAFG00000009300 TESC ENSFCAG00000002633 TESC ENSCPOG00000012005 TESC ENSOANG00000021581 TESC ENSGALG00000008206 TESC ENSACAG00000016473 TESC ENSXETG00000030230 tesc	Compare expression	[+]

Orthology information comes from OMA : ENSDARG00000030839.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Euteleostomi	1 gene ENSDARG00000028346 tesca	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000030839.

Cross-references

Ensembl	ENSDARG00000030839 (tescb)
ZFIN	ZDB-GENE-040426-1903 (tescb)
EMBL	BC065886, BX004981
Uniprot/SPTREMBL	Q6P005, Q6P005_DANRE