D. rerio Gene: srprb - ENSDARG00000030949 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000030949
Namesrprb
Descriptionsignal recognition particle receptor, B subunit [Source:ZFIN;Acc:ZDB-GENE-040718-311]
OrganismDanio rerio (zebrafish)
Synonym(s)wu:fk57h10, zgc:111820, zgc:92746
Orthologs(s)20 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
113
  • 113
99.62
  • 99.62
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
297
  • 297
99.01
  • 99.01
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
  • ZFS:0000049segmentation
  • UBERON:0000104life cycle
409
  • 409
  • 658
  • 715
  • 744
  • 877
  • 1.15e3
  • 1.62e3
  • 2.63e3
  • 2.82e3
  • 2.91e3
  • 3.43e3
  • 3.83e3
  • 4.24e3
  • 7.41e3
  • 1.49e4
  • 1.49e4
  • 1.49e4
  • 1.50e4
98.63
  • 98.63
  • 97.80
  • 97.61
  • 97.51
  • 97.07
  • 96.16
  • 94.58
  • 91.19
  • 90.57
  • 90.26
  • 88.51
  • 87.17
  • 85.79
  • 75.19
  • 50.25
  • 50.20
  • 49.95
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
425
  • 425
98.58
  • 98.58
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
612
  • 612
  • 645
  • 725
  • 910
  • 1.04e3
97.95
  • 97.95
  • 97.84
  • 97.57
  • 96.96
  • 96.51
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
667
  • 667
  • 722
  • 739
  • 859
  • 983
  • 1.38e3
97.77
  • 97.77
  • 97.59
  • 97.53
  • 97.13
  • 96.71
  • 95.40
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
1.01e3
  • 1.01e3
  • 1.12e3
  • 1.26e3
  • 1.44e3
  • 1.74e3
  • 2.24e3
  • 2.29e3
  • 2.44e3
  • 2.58e3
  • 3.46e3
96.61
  • 96.61
  • 96.24
  • 95.79
  • 95.17
  • 94.19
  • 92.51
  • 92.33
  • 91.85
  • 91.36
  • 88.41
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.08e3
  • 1.08e3
96.39
  • 96.39
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.16e3
  • 1.16e3
96.13
  • 96.13
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.36e3
  • 1.36e3
95.46
  • 95.46
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.39e3
  • 1.39e3
  • 2.77e3
  • 2.83e3
  • 4.20e3
95.35
  • 95.35
  • 90.73
  • 90.51
  • 85.94
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.51e3
  • 1.51e3
94.93
  • 94.93
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.52e3
  • 1.52e3
94.90
  • 94.90
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.58e3
  • 1.58e3
94.71
  • 94.71
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.62e3
  • 1.62e3
94.57
  • 94.57
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.72e3
  • 1.72e3
94.26
  • 94.26
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.84e3
  • 1.84e3
93.85
  • 93.85
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.95e3
  • 1.95e3
93.47
  • 93.47
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
2.23e3
  • 2.23e3
  • 5.68e3
92.55
  • 92.55
  • 80.99
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
2.41e3
  • 2.41e3
  • 2.48e3
  • 4.48e3
91.93
  • 91.93
  • 91.69
  • 85.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
2.47e3
  • 2.47e3
91.73
  • 91.73
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
2.64e3
  • 2.64e3
  • 4.00e3
  • 1.45e4
91.18
  • 91.18
  • 86.60
  • 51.33
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
2.64e3
  • 2.64e3
91.15
  • 91.15
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
2.73e3
  • 2.73e3
90.86
  • 90.86
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.84e3
  • 2.84e3
90.48
  • 90.48
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
2.91e3
  • 2.91e3
90.28
  • 90.28
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
3.23e3
  • 3.23e3
89.20
  • 89.20
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
3.61e3
  • 3.61e3
  • 3.77e3
87.91
  • 87.91
  • 87.36
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
4.11e3
  • 4.11e3
86.25
  • 86.25
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
4.25e3
  • 4.25e3
  • 1.50e4
85.79
  • 85.79
  • 49.92
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.95e3
  • 6.95e3
76.73
  • 76.73
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
1.30e4
  • 1.30e4
  • 1.46e4
56.48
  • 56.48
  • 51.26
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.52e4
  • 1.52e4
49.06
  • 49.06
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi13 species13 genesCompare expression
Bilateria20 species20 genesCompare expression

Orthology information comes from OMA : ENSDARG00000030949.

Cross-references

EnsemblENSDARG00000030949 (srprb)
ZFINZDB-GENE-040718-311 (srprb)
EMBLCU694376
Uniprot/SPTREMBLF1QSB3, F1QSB3_DANRE

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