D. rerio Gene: si:ch211-51a6.2 - ENSDARG00000030967 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000030967
Namesi:ch211-51a6.2
Descriptionsi:ch211-51a6.2 [Source:ZFIN;Acc:ZDB-GENE-090313-118]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
9.29e3
  • 9.29e3
68.90
  • 68.90
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.72
  • 64.72
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
1.12e4
  • 1.12e4
  • 1.24e4
  • 1.32e4
  • 1.35e4
  • 1.83e4
62.47
  • 62.47
  • 58.47
  • 55.84
  • 54.90
  • 38.70
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
60.38
  • 60.38
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
  • 1.68e4
60.23
  • 60.23
  • 43.63
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.43e4
  • 1.43e4
51.99
  • 51.99
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.49e4
  • 1.49e4
  • 1.82e4
50.09
  • 50.09
  • 39.01
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.57e4
  • 1.57e4
47.35
  • 47.35
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.66e4
  • 1.66e4
44.54
  • 44.54
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.69e4
  • 1.69e4
43.53
  • 43.53
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.83e4
  • 1.83e4
38.84
  • 38.84
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.83e4
  • 1.83e4
  • 1.84e4
38.64
  • 38.64
  • 38.53
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.92e4
  • 1.92e4
35.79
  • 35.79
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.02e4
  • 2.02e4
32.52
  • 32.52
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.03e4
  • 2.03e4
32.03
  • 32.03
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.09e4
  • 2.09e4
29.90
  • 29.90
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.14e4
  • 2.14e4
28.43
  • 28.43
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLBX649428, CT025779, CT573233
EnsemblENSDARG00000030967 (si:ch211-51a6.2)
Uniprot/SPTREMBLF1QKL3, F1QKL3_DANRE, F1QX88, F1QX88_DANRE
ZFINZDB-GENE-090313-118 (si:ch211-51a6.2)

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