D. rerio Gene: pip4k2ca - ENSDARG00000031020 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000031020
Namepip4k2ca
Descriptionphosphatidylinositol-5-phosphate 4-kinase, type II, gamma a [Source:ZFIN;Acc:ZDB-GENE-030828-9]
OrganismDanio rerio (zebrafish)
Synonym(s)cb770, pip4k2c, pip5k2, pip5k2c, zgc:56046
Orthologs(s)22 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
1.25e3
  • 1.25e3
  • 1.58e3
  • 1.65e3
  • 2.09e3
  • 2.42e3
95.81
  • 95.81
  • 94.72
  • 94.48
  • 93.00
  • 91.89
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.29e3
  • 1.29e3
95.67
  • 95.67
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.39e3
  • 1.39e3
95.36
  • 95.36
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
1.51e3
  • 1.51e3
  • 2.06e3
  • 2.13e3
  • 3.29e3
  • 3.32e3
  • 3.66e3
94.95
  • 94.95
  • 93.10
  • 92.87
  • 88.97
  • 88.89
  • 87.75
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.66e3
  • 1.66e3
94.43
  • 94.43
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000106zygote stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
1.78e3
  • 1.78e3
  • 1.97e3
  • 2.37e3
  • 2.97e3
  • 3.08e3
  • 3.50e3
  • 3.67e3
  • 3.69e3
  • 3.88e3
  • 3.99e3
  • 4.22e3
  • 4.23e3
  • 4.53e3
  • 4.64e3
94.06
  • 94.06
  • 93.40
  • 92.06
  • 90.06
  • 89.70
  • 88.29
  • 87.71
  • 87.63
  • 87.00
  • 86.63
  • 85.89
  • 85.85
  • 84.82
  • 84.47
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.98e3
  • 1.98e3
93.38
  • 93.38
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.01e3
  • 2.01e3
93.29
  • 93.29
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000068embryo stage
2.12e3
  • 2.12e3
  • 2.29e3
  • 2.48e3
  • 3.17e3
  • 3.22e3
  • 3.34e3
  • 3.44e3
  • 3.49e3
  • 4.08e3
  • 4.19e3
92.91
  • 92.91
  • 92.35
  • 91.69
  • 89.39
  • 89.22
  • 88.82
  • 88.48
  • 88.31
  • 86.36
  • 85.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
2.13e3
  • 2.13e3
  • 2.45e3
  • 3.53e3
  • 4.97e3
92.87
  • 92.87
  • 91.81
  • 88.19
  • 83.38
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
2.21e3
  • 2.21e3
92.59
  • 92.59
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.30e3
  • 2.30e3
92.32
  • 92.32
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.32e3
  • 2.32e3
92.25
  • 92.25
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
2.34e3
  • 2.34e3
  • 3.50e3
92.17
  • 92.17
  • 88.28
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
2.43e3
  • 2.43e3
  • 3.37e3
91.86
  • 91.86
  • 88.70
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
2.54e3
  • 2.54e3
  • 3.07e3
91.51
  • 91.51
  • 89.73
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
2.66e3
  • 2.66e3
  • 3.32e3
  • 4.47e3
91.10
  • 91.10
  • 88.89
  • 85.04
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
3.01e3
  • 3.01e3
89.91
  • 89.91
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
3.14e3
  • 3.14e3
89.48
  • 89.48
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
3.20e3
  • 3.20e3
89.30
  • 89.30
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
3.25e3
  • 3.25e3
89.13
  • 89.13
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
3.28e3
  • 3.28e3
89.04
  • 89.04
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
3.39e3
  • 3.39e3
88.66
  • 88.66
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
3.51e3
  • 3.51e3
88.26
  • 88.26
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
3.56e3
  • 3.56e3
88.10
  • 88.10
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
3.59e3
  • 3.59e3
  • 3.63e3
87.98
  • 87.98
  • 87.86
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
3.71e3
  • 3.71e3
87.59
  • 87.59
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
4.50e3
  • 4.50e3
84.95
  • 84.95
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.96e3
  • 4.96e3
83.38
  • 83.38
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
4.97e3
  • 4.97e3
83.36
  • 83.36
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
5.37e3
  • 5.37e3
82.01
  • 82.01
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
8.04e3
  • 8.04e3
  • 9.25e3
  • 9.67e3
  • 9.71e3
  • 9.96e3
  • 9.96e3
  • 1.10e4
73.07
  • 73.07
  • 69.03
  • 67.63
  • 67.48
  • 66.65
  • 66.65
  • 63.32
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001555digestive tract
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
1.21e4
  • 1.21e4
  • 1.28e4
59.36
  • 59.36
  • 57.13
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi15 species15 genesCompare expression
Bilateria22 species22 genesCompare expression

Orthology information comes from OMA : ENSDARG00000031020.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Bilateria3 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000031020.

Cross-references

EnsemblENSDARG00000031020 (pip4k2ca)
ZFINZDB-GENE-030828-9 (pip4k2ca)
EMBLBX321896
Uniprot/SPTREMBLF1REU6, F1REU6_DANRE

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