D. rerio Gene: nr1h5 - ENSDARG00000031046 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000031046
Namenr1h5
Descriptionnuclear receptor subfamily 1, group H, member 5 [Source:ZFIN;Acc:ZDB-GENE-080403-3]
OrganismDanio rerio (zebrafish)
Synonym(s)fxrbeta, gb:dq017614

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
938
  • 938
96.86
  • 96.86
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
2.29e3
  • 2.29e3
  • 1.20e4
  • 1.24e4
  • 1.40e4
  • 1.42e4
92.32
  • 92.32
  • 59.98
  • 58.32
  • 53.10
  • 52.35
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
7.88e3
  • 7.88e3
73.62
  • 73.62
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.27
  • 61.27
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
56.21
  • 56.21
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
1.34e4
  • 1.34e4
  • 1.45e4
  • 1.63e4
  • 1.68e4
  • 1.71e4
55.00
  • 55.00
  • 51.55
  • 45.56
  • 43.79
  • 42.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000104life cycle
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000036Larval:Day 4
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000033Hatching:Long-pec
1.47e4
  • 1.47e4
  • 1.56e4
  • 1.62e4
  • 1.63e4
  • 1.70e4
  • 1.71e4
  • 1.73e4
  • 1.78e4
  • 1.81e4
50.90
  • 50.90
  • 47.76
  • 45.89
  • 45.33
  • 43.05
  • 42.87
  • 42.05
  • 40.52
  • 39.42
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.52e4
  • 1.52e4
  • 1.79e4
48.98
  • 48.98
  • 39.95
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
1.54e4
  • 1.54e4
  • 1.57e4
  • 1.60e4
48.51
  • 48.51
  • 47.44
  • 46.53
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
1.60e4
  • 1.60e4
46.49
  • 46.49
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
1.63e4
  • 1.63e4
  • 1.83e4
45.32
  • 45.32
  • 38.61
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.65e4
  • 1.65e4
44.63
  • 44.63
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.68e4
  • 1.68e4
43.66
  • 43.66
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.77
  • 40.77
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.78e4
  • 1.78e4
40.36
  • 40.36
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.78e4
  • 1.78e4
  • 1.97e4
40.32
  • 40.32
  • 34.06
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.80e4
  • 1.80e4
39.59
  • 39.59
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.97e4
  • 1.97e4
33.99
  • 33.99
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.03e4
  • 2.03e4
32.12
  • 32.12
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBX321886
EnsemblENSDARG00000031046 (nr1h5)
Uniprot/SPTREMBLB0S5T9, B0S5T9_DANRE
ZFINZDB-GENE-080403-3 (nr1h5)

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