D. rerio Gene: ppdpfb - ENSDARG00000031317 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000031317
Nameppdpfb
Descriptionpancreatic progenitor cell differentiation and proliferation factor b [Source:ZFIN;Acc:ZDB-GENE-030131-8247]
OrganismDanio rerio (zebrafish)
Synonym(s)c20orf149b, c20orf149l, endocrine differentiation and proliferation factor, endpf, exdpfb, wu:fj62f01, zgc:73395

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
92.4
  • 92.4
99.69
  • 99.69
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
152
  • 152
99.49
  • 99.49
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
161
  • 161
  • 453
99.46
  • 99.46
  • 98.49
AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
199
  • 199
99.34
  • 99.34
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
241
  • 241
99.20
  • 99.20
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000026Segmentation:14-19 somites
261
  • 261
  • 440
  • 585
  • 636
  • 731
  • 830
  • 1.02e3
  • 1.45e3
  • 4.41e3
  • 5.00e3
  • 5.13e3
  • 5.18e3
  • 5.47e3
  • 5.74e3
99.13
  • 99.13
  • 98.53
  • 98.04
  • 97.87
  • 97.56
  • 97.22
  • 96.58
  • 95.16
  • 85.24
  • 83.26
  • 82.84
  • 82.67
  • 81.68
  • 80.79
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
261
  • 261
  • 285
  • 313
  • 1.93e3
  • 2.94e3
99.13
  • 99.13
  • 99.05
  • 98.96
  • 93.55
  • 90.16
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
267
  • 267
99.11
  • 99.11
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
284
  • 284
  • 490
  • 504
99.05
  • 99.05
  • 98.36
  • 98.31
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000024Segmentation:5-9 somites
289
  • 289
  • 557
  • 571
  • 587
  • 616
  • 1.25e3
  • 1.28e3
  • 1.87e3
  • 2.12e3
  • 3.43e3
99.04
  • 99.04
  • 98.14
  • 98.09
  • 98.04
  • 97.94
  • 95.81
  • 95.71
  • 93.74
  • 92.92
  • 88.52
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
311
  • 311
98.96
  • 98.96
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
312
  • 312
  • 1.06e3
98.96
  • 98.96
  • 96.47
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
345
  • 345
98.85
  • 98.85
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
369
  • 369
  • 510
98.77
  • 98.77
  • 98.30
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
391
  • 391
98.69
  • 98.69
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
536
  • 536
98.21
  • 98.21
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
558
  • 558
98.13
  • 98.13
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
572
  • 572
98.09
  • 98.09
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
579
  • 579
  • 3.74e3
98.07
  • 98.07
  • 87.47
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
  • ZFS:0000032Pharyngula:High-pec
584
  • 584
  • 884
  • 3.72e3
  • 5.95e3
  • 1.05e4
98.05
  • 98.05
  • 97.04
  • 87.53
  • 80.08
  • 64.98
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
676
  • 676
97.74
  • 97.74
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
724
  • 724
97.58
  • 97.58
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
787
  • 787
97.37
  • 97.37
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
834
  • 834
97.21
  • 97.21
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.04e3
  • 1.04e3
96.51
  • 96.51
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.22e3
  • 1.22e3
95.92
  • 95.92
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.39e3
  • 1.39e3
95.35
  • 95.35
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
2.19e3
  • 2.19e3
  • 2.41e3
  • 2.41e3
  • 3.48e3
  • 3.49e3
  • 4.97e3
92.69
  • 92.69
  • 91.95
  • 91.94
  • 88.35
  • 88.33
  • 83.37
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
3.50e3
  • 3.50e3
88.28
  • 88.28
AEIR
  • AEIR
UBERON:0003922pancreatic epithelial bud
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
4.07e3
  • 4.07e3
  • 6.22e3
86.36
  • 86.36
  • 79.16
AEIR
  • AEIR
  • AEIR
CL:0000319mucus secreting cell
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
4.48e3
  • 4.48e3
  • 4.98e3
  • 6.89e3
  • 6.89e3
  • 6.89e3
85.00
  • 85.00
  • 83.33
  • 76.92
  • 76.92
  • 76.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003060pronephric duct
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
4.67e3
  • 4.67e3
  • 4.67e3
  • 7.47e3
  • 7.47e3
  • 7.86e3
84.37
  • 84.37
  • 84.37
  • 74.99
  • 74.99
  • 73.67
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001890forebrain
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
5.75e3
  • 5.75e3
  • 6.89e3
  • 8.79e3
  • 8.79e3
  • 9.13e3
80.76
  • 80.76
  • 76.92
  • 70.57
  • 70.57
  • 69.43
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001905pineal body
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
6.54e3
  • 6.54e3
  • 7.47e3
  • 9.33e3
  • 9.44e3
  • 9.96e3
78.12
  • 78.12
  • 74.99
  • 68.74
  • 68.40
  • 66.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
7.69e3
  • 7.69e3
74.24
  • 74.24
AEIR
  • AEIR
UBERON:0003921pancreas primordium
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
8.04e3
  • 8.04e3
  • 8.15e3
  • 8.71e3
73.07
  • 73.07
  • 72.72
  • 70.82
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001791inner nuclear layer of retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
8.30e3
  • 8.30e3
  • 1.09e4
  • 1.12e4
72.22
  • 72.22
  • 63.63
  • 62.49
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
8.31e3
  • 8.31e3
72.16
  • 72.16
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
8.72e3
  • 8.72e3
70.80
  • 70.80
AEIR
  • AEIR
UBERON:0001892rhombomere
  • ZFS:0000026Segmentation:14-19 somites
9.60e3
  • 9.60e3
67.85
  • 67.85
AEIR
  • AEIR
UBERON:0002028hindbrain
  • ZFS:0000026Segmentation:14-19 somites
1.12e4
  • 1.12e4
62.48
  • 62.48
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EnsemblENSDARG00000031317 (ppdpfb)
ZFINZDB-GENE-030131-8247 (ppdpfb)
EMBLBC059699
Uniprot/SWISSPROTPDPFB_DANRE, Q6PBI2

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