Gene: mc5ra - ENSDARG00000031348 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000031348
Name	mc5ra
Description	melanocortin 5a receptor [Source:ZFIN;Acc:ZDB-GENE-021223-3]
Organism	Danio rerio (zebrafish)
Synonym(s)	mc5ar, mc5rb, mc5rbgn, zmc5a
Orthologs(s)	16 orthologs
Paralog(s)	1 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	6.31e3 6.31e3	78.87 78.87	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	1.43e4 1.43e4	52.10 52.10	AEIR AEIR
UBERON:0000033	head	[+] 2 stages UBERON:0000066fully formed stage ZFS:0000037Larval:Day 5	1.46e4 1.46e4 1.46e4	50.99 50.99 50.99	AEIR AEIR AEIR
UBERON:0000922	embryo	[+] 5 stages ZFS:0000037Larval:Day 5 ZFS:0000033Hatching:Long-pec ZFS:0000029Pharyngula:Prim-5 UBERON:0000068embryo stage UBERON:0004707pharyngula stage	1.48e4 1.48e4 1.51e4 1.61e4 1.67e4 1.77e4	50.32 50.32 49.47 46.10 44.10 40.82	AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0002548	larva	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000069larval stage	1.64e4 1.64e4 1.83e4	44.95 44.95 38.74	AEIR AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	1.95e4 1.95e4	34.80 34.80	AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	2.11e4 2.11e4	29.37 29.37	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Euteleostomi	16 species Homo sapiens (human) Mus musculus (mouse) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Monodelphis domestica (opossum) Ornithorhynchus anatinus (platypus) Gallus gallus (chicken) Xenopus tropicalis (western clawed frog)	16 genes ENSG00000176136 MC5R ENSMUSG00000007480 Mc5r ENSGGOG00000023448 MC5R ENSMMUG00000016679 MC5R ENSRNOG00000016685 Mc5r ENSBTAG00000009143 MC5R ENSSSCG00000028411 MC5R ENSOCUG00000000725 MC5R ENSCAFG00000000171 MC5R ENSFCAG00000002279 MC5R ENSCPOG00000007141 MC5R ENSEEUG00000015627 MC5R ENSMODG00000021414 MC5R ENSOANG00000002381 MC5R ENSGALG00000013890 MC5R ENSXETG00000027297 mc5r	Compare expression	[+]

Orthology information comes from OMA : ENSDARG00000031348.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Deuterostomia	1 gene ENSDARG00000054946 mc5rb	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000031348.

Cross-references

Ensembl	ENSDARG00000031348 (mc5ra)
ZFIN	ZDB-GENE-021223-3 (mc5ra)
EMBL	AL844521, AL928820, AY078990, AY161852, BC162797, BC162815
Uniprot/SPTREMBL	A3KGQ1, A3KGQ1_DANRE, Q8JGW2, Q8JGW2_DANRE