D. rerio Gene: calm2a - ENSDARG00000031427 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000031427
Namecalm2a
Descriptioncalmodulin 2a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030804-3]
OrganismDanio rerio (zebrafish)
Synonym(s)calm1b, calm2d, calm2g, calmx3, cam3 gamma, camalpha, camgamma, cb815, q4v949, wu:fi05b08, wu:fj49d04, zgc:73045, zgc:86728
Orthologs(s)55 orthologs
Paralog(s)49 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
234
  • 234
99.22
  • 99.22
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
337
  • 337
  • 946
  • 1.20e3
  • 1.68e3
  • 1.75e3
  • 1.98e3
98.87
  • 98.87
  • 96.84
  • 95.97
  • 94.39
  • 94.14
  • 93.38
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
338
  • 338
  • 667
98.87
  • 98.87
  • 97.77
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
352
  • 352
  • 540
98.82
  • 98.82
  • 98.20
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000016Blastula:30%-epiboly
372
  • 372
  • 397
  • 807
  • 1.16e3
  • 2.30e3
98.76
  • 98.76
  • 98.67
  • 97.30
  • 96.12
  • 92.31
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
491
  • 491
  • 2.65e3
  • 3.79e3
  • 8.74e3
98.36
  • 98.36
  • 91.11
  • 87.30
  • 70.74
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
546
  • 546
  • 2.16e3
98.18
  • 98.18
  • 92.78
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
556
  • 556
  • 645
  • 692
98.14
  • 98.14
  • 97.84
  • 97.68
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
560
  • 560
  • 657
  • 841
  • 940
  • 1.01e3
  • 1.63e3
  • 1.79e3
  • 1.82e3
  • 2.11e3
  • 2.60e3
98.13
  • 98.13
  • 97.80
  • 97.19
  • 96.85
  • 96.61
  • 94.53
  • 94.03
  • 93.91
  • 92.95
  • 91.29
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
638
  • 638
97.87
  • 97.87
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • UBERON:0000106zygote stage
  • ZFS:0000036Larval:Day 4
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
732
  • 732
  • 869
  • 896
  • 1.14e3
  • 1.47e3
  • 1.50e3
  • 1.61e3
  • 1.62e3
  • 1.78e3
  • 1.88e3
  • 1.93e3
  • 2.32e3
  • 3.59e3
  • 3.65e3
97.55
  • 97.55
  • 97.09
  • 97.00
  • 96.19
  • 95.08
  • 94.99
  • 94.62
  • 94.58
  • 94.06
  • 93.72
  • 93.53
  • 92.23
  • 87.97
  • 87.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
737
  • 737
97.54
  • 97.54
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
851
  • 851
97.16
  • 97.16
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
893
  • 893
97.01
  • 97.01
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
915
  • 915
96.94
  • 96.94
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
952
  • 952
96.82
  • 96.82
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
976
  • 976
96.74
  • 96.74
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
985
  • 985
96.71
  • 96.71
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
998
  • 998
96.66
  • 96.66
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.19e3
  • 1.19e3
96.04
  • 96.04
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.19e3
  • 1.19e3
96.02
  • 96.02
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.22e3
  • 1.22e3
95.91
  • 95.91
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.55e3
  • 1.55e3
94.80
  • 94.80
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.58e3
  • 1.58e3
94.70
  • 94.70
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.71e3
  • 1.71e3
94.27
  • 94.27
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.80e3
  • 1.80e3
  • 2.60e3
93.97
  • 93.97
  • 91.29
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.12e3
  • 2.12e3
92.90
  • 92.90
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.35e3
  • 2.35e3
92.12
  • 92.12
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
2.99e3
  • 2.99e3
89.97
  • 89.97
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
3.30e3
  • 3.30e3
88.96
  • 88.96
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
3.36e3
  • 3.36e3
88.74
  • 88.74
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
4.85e3
  • 4.85e3
83.75
  • 83.75
AEIR
  • AEIR
UBERON:0003070trigeminal placode complex
  • ZFS:0000026Segmentation:14-19 somites
8.54e3
  • 8.54e3
71.42
  • 71.42
AEIR
  • AEIR
UBERON:0001792ganglionic layer of retina
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
8.96e3
  • 8.96e3
  • 1.12e4
69.99
  • 69.99
  • 62.49
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
8.96e3
  • 8.96e3
  • 9.34e3
69.99
  • 69.99
  • 68.74
AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
9.19e3
  • 9.19e3
  • 9.19e3
  • 9.96e3
  • 9.96e3
  • 1.07e4
69.22
  • 69.22
  • 69.22
  • 66.66
  • 66.66
  • 64.27
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001714cranial ganglion
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
9.34e3
  • 9.34e3
  • 9.60e3
  • 9.60e3
  • 9.96e3
  • 9.96e3
68.74
  • 68.74
  • 67.85
  • 67.85
  • 66.65
  • 66.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000004nose
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
9.67e3
  • 9.67e3
  • 9.67e3
67.63
  • 67.63
  • 67.63
AEIR
  • AEIR
  • AEIR
UBERON:0005426lens vesicle
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
9.67e3
  • 9.67e3
  • 1.03e4
  • 1.05e4
67.63
  • 67.63
  • 65.61
  • 64.98
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2000120lateral line ganglion
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
9.96e3
  • 9.96e3
  • 9.96e3
66.66
  • 66.66
  • 66.66
AEIR
  • AEIR
  • AEIR
UBERON:0001905pineal body
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
9.96e3
  • 9.96e3
  • 1.03e4
  • 1.07e4
66.65
  • 66.65
  • 65.61
  • 64.26
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001943midbrain tegmentum
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000031Pharyngula:Prim-25
9.96e3
  • 9.96e3
  • 1.03e4
  • 1.05e4
  • 1.05e4
  • 1.05e4
66.65
  • 66.65
  • 65.61
  • 64.69
  • 64.69
  • 64.69
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.02e4
  • 1.02e4
  • 1.07e4
  • 1.09e4
  • 1.12e4
  • 1.12e4
65.89
  • 65.89
  • 64.26
  • 63.61
  • 62.48
  • 62.48
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003050olfactory placode
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.03e4
  • 1.03e4
  • 1.05e4
  • 1.08e4
  • 1.08e4
65.61
  • 65.61
  • 64.98
  • 63.87
  • 63.87
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001017central nervous system
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
1.03e4
  • 1.03e4
  • 1.07e4
65.37
  • 65.37
  • 64.27
AEIR
  • AEIR
  • AEIR
UBERON:0003921pancreas primordium
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.03e4
  • 1.03e4
  • 1.09e4
  • 1.12e4
65.37
  • 65.37
  • 63.63
  • 62.49
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001049neural tube
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.04e4
  • 1.04e4
  • 1.05e4
  • 1.12e4
  • 1.12e4
65.19
  • 65.19
  • 64.98
  • 62.48
  • 62.48
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001894diencephalon
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000027Segmentation:20-25 somites
1.04e4
  • 1.04e4
  • 1.06e4
  • 1.09e4
  • 1.10e4
  • 1.10e4
65.19
  • 65.19
  • 64.56
  • 63.61
  • 63.14
  • 63.02
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002028hindbrain
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
1.04e4
  • 1.04e4
  • 1.05e4
  • 1.05e4
  • 1.07e4
  • 1.07e4
65.19
  • 65.19
  • 64.98
  • 64.98
  • 64.26
  • 64.26
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003060pronephric duct
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
1.05e4
  • 1.05e4
  • 1.05e4
  • 1.10e4
  • 1.14e4
  • 1.21e4
64.98
  • 64.98
  • 64.98
  • 63.14
  • 61.75
  • 59.36
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0010285midbrain basal plate
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
1.05e4
  • 1.05e4
  • 1.05e4
  • 1.05e4
64.69
  • 64.69
  • 64.69
  • 64.69
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2000083ventral mesoderm
  • ZFS:0000026Segmentation:14-19 somites
1.05e4
  • 1.05e4
64.69
  • 64.69
AEIR
  • AEIR
UBERON:0003069otic placode
  • ZFS:0000026Segmentation:14-19 somites
1.10e4
  • 1.10e4
63.14
  • 63.14
AEIR
  • AEIR
UBERON:0002540lateral line system
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
1.12e4
  • 1.12e4
  • 1.12e4
62.49
  • 62.49
  • 62.49
AEIR
  • AEIR
  • AEIR
UBERON:2000058polster
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
1.16e4
  • 1.16e4
  • 1.16e4
  • 1.20e4
61.09
  • 61.09
  • 61.09
  • 59.98
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002328notochord
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
1.20e4
  • 1.20e4
  • 1.22e4
  • 1.22e4
59.98
  • 59.98
  • 59.06
  • 59.06
AEIR
  • AEIR
  • AEIR
  • AEIR
ZFA:0000092axis (Danio)
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000021Gastrula:90%-epiboly
1.33e4
  • 1.33e4
  • 1.33e4
  • 1.33e4
  • 1.41e4
  • 1.41e4
  • 1.41e4
55.53
  • 55.53
  • 55.53
  • 55.53
  • 52.92
  • 52.92
  • 52.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi19 species44 genesCompare expression
Bilateria25 species55 genesCompare expression

Orthology information comes from OMA : ENSDARG00000031427.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Otophysi5 genesCompare expression
Eukaryota49 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000031427.

Cross-references

EnsemblENSDARG00000031427 (calm2a)
ZFINZDB-GENE-030131-5590 (calm3a), ZDB-GENE-030804-3 (calm2a)
EMBLAL928712, AL935145, BC044434, BC045298, BC053150, BC054600, BC059427, BC059500, BC065426, BC066752, BC068339, BC071404, BC097062, BC164893, BX465841, BX927291, CABZ01000129, CU855905
Uniprot/SPTREMBLB2GQW3, B2GQW3_DANRE
Uniprot/SWISSPROTCALM_DANRE, Q6PI52

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