D. rerio Gene: pan3 - ENSDARG00000031637 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000031637
Namepan3
DescriptionPAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-070928-13]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:171628

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
845
  • 845
97.17
  • 97.17
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.11e3
  • 1.11e3
96.30
  • 96.30
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
3.85e3
  • 3.85e3
  • 4.88e3
87.11
  • 87.11
  • 83.68
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
4.03e3
  • 4.03e3
  • 5.01e3
86.51
  • 86.51
  • 83.23
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
4.19e3
  • 4.19e3
85.99
  • 85.99
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
4.59e3
  • 4.59e3
  • 5.92e3
  • 6.21e3
  • 6.69e3
  • 7.17e3
84.64
  • 84.64
  • 80.17
  • 79.20
  • 77.60
  • 75.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
4.59e3
  • 4.59e3
84.63
  • 84.63
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
4.61e3
  • 4.61e3
  • 7.14e3
84.58
  • 84.58
  • 76.08
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
5.16e3
  • 5.16e3
82.71
  • 82.71
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
5.61e3
  • 5.61e3
81.21
  • 81.21
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.66e3
  • 5.66e3
81.06
  • 81.06
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
5.82e3
  • 5.82e3
80.50
  • 80.50
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
5.83e3
  • 5.83e3
80.49
  • 80.49
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.94e3
  • 5.94e3
80.10
  • 80.10
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.36e3
  • 6.36e3
78.71
  • 78.71
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.58e3
  • 6.58e3
77.96
  • 77.96
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
6.59e3
  • 6.59e3
77.92
  • 77.92
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
6.94e3
  • 6.94e3
76.78
  • 76.78
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
7.18e3
  • 7.18e3
75.95
  • 75.95
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
7.80e3
  • 7.80e3
73.88
  • 73.88
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
8.25e3
  • 8.25e3
  • 8.93e3
72.38
  • 72.38
  • 70.09
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.57
  • 63.57
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.19
  • 60.19
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.21e4
  • 1.21e4
59.56
  • 59.56
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

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