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D. rerio Gene: pus7 - ENSDARG00000031774 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000031774
Namepus7
Descriptionpseudouridylate synthase 7 (putative) [Source:ZFIN;Acc:ZDB-GENE-060620-1]
OrganismDanio rerio (zebrafish)
Orthologs(s)25 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000468multi-cellular organism
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000037Larval:Day 5
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000106zygote stage
  • ZFS:0000036Larval:Day 4
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
878
  • 878
  • 1.70e3
  • 2.49e3
  • 2.93e3
  • 3.13e3
  • 3.37e3
  • 3.48e3
  • 3.97e3
  • 4.35e3
  • 4.58e3
  • 4.99e3
  • 5.25e3
  • 5.36e3
  • 6.22e3
  • 6.43e3
  • 1.38e4
  • 1.49e4
97.06
  • 97.06
  • 94.32
  • 91.66
  • 90.19
  • 89.52
  • 88.72
  • 88.36
  • 86.71
  • 85.44
  • 84.68
  • 83.28
  • 82.41
  • 82.07
  • 79.16
  • 78.49
  • 53.85
  • 50.25
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.45e3
  • 1.45e3
95.14
  • 95.14
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.46e3
  • 1.46e3
95.13
  • 95.13
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000019Gastrula:Shield
1.93e3
  • 1.93e3
  • 3.22e3
  • 3.80e3
  • 5.04e3
  • 5.21e3
  • 5.29e3
93.54
  • 93.54
  • 89.23
  • 87.28
  • 83.11
  • 82.57
  • 82.30
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
2.22e3
  • 2.22e3
92.57
  • 92.57
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0004707pharyngula stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
2.48e3
  • 2.48e3
  • 2.59e3
  • 2.63e3
  • 3.13e3
  • 3.30e3
  • 4.08e3
  • 5.95e3
  • 6.23e3
  • 9.05e3
  • 1.11e4
91.71
  • 91.71
  • 91.34
  • 91.19
  • 89.52
  • 88.95
  • 86.35
  • 80.07
  • 79.13
  • 69.68
  • 62.82
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
3.57e3
  • 3.57e3
  • 5.14e3
  • 5.31e3
  • 1.03e4
88.05
  • 88.05
  • 82.80
  • 82.21
  • 65.58
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
3.77e3
  • 3.77e3
  • 7.26e3
87.39
  • 87.39
  • 75.69
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
4.36e3
  • 4.36e3
  • 5.82e3
  • 6.94e3
  • 7.24e3
  • 7.96e3
85.42
  • 85.42
  • 80.52
  • 76.76
  • 75.76
  • 73.34
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
4.38e3
  • 4.38e3
85.33
  • 85.33
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
4.53e3
  • 4.53e3
  • 5.87e3
84.83
  • 84.83
  • 80.35
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
4.99e3
  • 4.99e3
83.28
  • 83.28
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
5.10e3
  • 5.10e3
82.93
  • 82.93
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
5.24e3
  • 5.24e3
82.46
  • 82.46
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
5.35e3
  • 5.35e3
82.09
  • 82.09
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
5.44e3
  • 5.44e3
81.77
  • 81.77
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
5.74e3
  • 5.74e3
  • 6.84e3
  • 9.76e3
80.78
  • 80.78
  • 77.10
  • 67.33
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.22e3
  • 6.22e3
79.16
  • 79.16
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
6.31e3
  • 6.31e3
78.86
  • 78.86
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
6.42e3
  • 6.42e3
  • 9.21e3
78.51
  • 78.51
  • 69.18
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
6.69e3
  • 6.69e3
77.61
  • 77.61
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
6.98e3
  • 6.98e3
76.64
  • 76.64
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
7.01e3
  • 7.01e3
76.55
  • 76.55
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
7.51e3
  • 7.51e3
74.86
  • 74.86
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
7.77e3
  • 7.77e3
73.99
  • 73.99
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
7.79e3
  • 7.79e3
  • 9.67e3
73.90
  • 73.90
  • 67.64
AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
7.80e3
  • 7.80e3
73.89
  • 73.89
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
8.26e3
  • 8.26e3
72.35
  • 72.35
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
8.30e3
  • 8.30e3
72.20
  • 72.20
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
8.42e3
  • 8.42e3
71.80
  • 71.80
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
1.34e4
  • 1.34e4
55.16
  • 55.16
AEIR
  • AEIR
UBERON:0000080mesonephros
  • UBERON:0000104life cycle
1.50e4
  • 1.50e4
49.92
  • 49.92
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.52e4
  • 1.52e4
49.06
  • 49.06
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.85e4
  • 1.85e4
37.97
  • 37.97
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi18 species18 genesCompare expression
Bilateria25 species25 genesCompare expression

Orthology information comes from OMA : ENSDARG00000031774.

Cross-references

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