Gene: dhrs13b - ENSDARG00000031814 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000031814
Name	dhrs13b
Description	dehydrogenase/reductase (SDR family) member 13b [Source:ZFIN;Acc:ZDB-GENE-040801-253]
Organism	Danio rerio (zebrafish)
Synonym(s)	zgc:91936
Paralog(s)	37 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000066fully formed stage	2.16e3 2.16e3	92.77 92.77	AEIR AEIR
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	3.64e3 3.64e3	87.81 87.81	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	3.88e3 3.88e3	87.00 87.00	AEIR AEIR
UBERON:0000922	embryo	[+] 10 stages UBERON:0004707pharyngula stage ZFS:0000029Pharyngula:Prim-5 UBERON:0000068embryo stage ZFS:0000024Segmentation:5-9 somites ZFS:0000030Pharyngula:Prim-15 ZFS:0000031Pharyngula:Prim-25 ZFS:0000026Segmentation:14-19 somites ZFS:0000025Segmentation:10-13 somites ZFS:0000033Hatching:Long-pec ZFS:0000037Larval:Day 5	4.20e3 4.20e3 4.50e3 4.96e3 6.05e3 6.91e3 7.16e3 7.61e3 7.61e3 9.81e3 1.49e4	85.94 85.94 84.93 83.38 79.76 76.87 76.03 74.53 74.52 67.16 50.08	AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:4000164	caudal fin	[+] 2 stages ZFS:0000033Hatching:Long-pec UBERON:0000066fully formed stage	4.32e3 4.32e3 6.75e3	85.53 85.53 77.41	AEIR AEIR AEIR
UBERON:0004734	gastrula	[+] 6 stages ZFS:0000022Gastrula:Bud ZFS:0000019Gastrula:Shield ZFS:0000021Gastrula:90%-epiboly ZFS:0000017Gastrula:50%-epiboly ZFS:0000020Gastrula:75%-epiboly UBERON:0000109gastrula stage	4.46e3 4.46e3 6.25e3 6.55e3 7.63e3 7.87e3 9.37e3	85.08 85.08 79.06 78.07 74.46 73.66 68.62	AEIR AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000066fully formed stage	4.51e3 4.51e3	84.89 84.89	AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	4.73e3 4.73e3	84.17 84.17	AEIR AEIR
CL:0000094	granulocyte	[+] 1 stage UBERON:0000066fully formed stage	4.84e3 4.84e3	83.81 83.81	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	4.97e3 4.97e3	83.35 83.35	AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	5.16e3 5.16e3	82.74 82.74	AEIR AEIR
UBERON:0000307	blastula	[+] 5 stages ZFS:0000014Blastula:Sphere ZFS:0000009Blastula:256-cell ZFS:0000015Blastula:Dome ZFS:0000011Blastula:1k-cell ZFS:0000016Blastula:30%-epiboly	5.23e3 5.23e3 5.29e3 6.10e3 6.45e3 7.46e3	82.51 82.51 82.29 79.57 78.41 75.01	AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	5.39e3 5.39e3	81.97 81.97	AEIR AEIR
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	5.61e3 5.61e3	81.21 81.21	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	6.17e3 6.17e3	79.35 79.35	AEIR AEIR
UBERON:0003982	mature ovarian follicle	[+] 1 stage UBERON:0000066fully formed stage	6.27e3 6.27e3	79.02 79.02	AEIR AEIR
UBERON:0000468	multi-cellular organism	[+] 16 stages ZFS:0000024Segmentation:5-9 somites ZFS:0000022Gastrula:Bud ZFS:0000021Gastrula:90%-epiboly UBERON:0000106zygote stage ZFS:0000020Gastrula:75%-epiboly ZFS:0000026Segmentation:14-19 somites ZFS:0000019Gastrula:Shield ZFS:0000029Pharyngula:Prim-5 ZFS:0000042Juvenile:Days 30-44 ZFS:0000040Larval:Days 14-20 ZFS:0000030Pharyngula:Prim-15 ZFS:0000036Larval:Day 4 ZFS:0000033Hatching:Long-pec ZFS:0000037Larval:Day 5 UBERON:0000068embryo stage UBERON:0000066fully formed stage	6.43e3 6.43e3 6.47e3 6.90e3 7.09e3 7.58e3 7.93e3 8.48e3 8.48e3 8.67e3 8.80e3 9.52e3 1.11e4 1.18e4 1.35e4 1.40e4 1.50e4	78.47 78.47 78.32 76.89 76.27 74.63 73.44 71.61 71.59 70.98 70.54 68.11 62.81 60.47 54.72 53.03 49.81	AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0007010	cleaving embryo	[+] 1 stage ZFS:0000005Cleavage:16-cell	6.69e3 6.69e3	77.59 77.59	AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000066fully formed stage	7.46e3 7.46e3	75.02 75.02	AEIR AEIR
UBERON:0002329	somite	[+] 1 stage ZFS:0000025Segmentation:10-13 somites	7.47e3 7.47e3	74.98 74.98	AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	7.89e3 7.89e3	73.57 73.57	AEIR AEIR
UBERON:0000955	brain	[+] 2 stages ZFS:0000031Pharyngula:Prim-25 UBERON:0000066fully formed stage	8.32e3 8.32e3 1.38e4	72.15 72.15 53.70	AEIR AEIR AEIR
UBERON:0000033	head	[+] 2 stages UBERON:0000066fully formed stage ZFS:0000037Larval:Day 5	8.40e3 8.40e3 1.69e4	71.88 71.88 43.50	AEIR AEIR AEIR
UBERON:0000948	heart	[+] 2 stages UBERON:0000066fully formed stage ZFS:0000036Larval:Day 4	8.48e3 8.48e3 1.05e4	71.61 71.61 64.69	AEIR AEIR AEIR
UBERON:0000970	eye	[+] 1 stage ZFS:0000031Pharyngula:Prim-25	8.71e3 8.71e3	70.82 70.82	AEIR AEIR
UBERON:0019248	early embryo	[+] 1 stage UBERON:0000107cleavage stage	9.01e3 9.01e3	69.83 69.83	AEIR AEIR
UBERON:0001630	muscle organ	[+] 1 stage UBERON:0000066fully formed stage	9.29e3 9.29e3	68.89 68.89	AEIR AEIR
UBERON:0003077	paraxial mesoderm	[+] 1 stage ZFS:0000025Segmentation:10-13 somites	9.77e3 9.77e3	67.27 67.27	AEIR AEIR
UBERON:0002548	larva	[+] 3 stages UBERON:0000069larval stage ZFS:0000035Larval:Protruding-mouth ZFS:0000037Larval:Day 5	1.01e4 1.01e4 1.33e4 1.34e4	66.25 66.25 55.35 54.99	AEIR AEIR AEIR AEIR
UBERON:0009620	tail bud paraxial mesoderm	[+] 1 stage ZFS:0000027Segmentation:20-25 somites	1.04e4 1.04e4	65.18 65.18	AEIR AEIR
UBERON:0003059	presomitic mesoderm	[+] 1 stage ZFS:0000025Segmentation:10-13 somites	1.06e4 1.06e4	64.41 64.41	AEIR AEIR
UBERON:0000966	retina	[+] 2 stages ZFS:0000031Pharyngula:Prim-25 ZFS:0000033Hatching:Long-pec	1.09e4 1.09e4 1.39e4	63.62 63.62 53.47	AEIR AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000066fully formed stage	1.34e4 1.34e4	55.13 55.13	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

Affymetrix data: Bgee
EST data: Bgee
RNA-Seq data: Bgee

Sources of raw data:

Affymetrix data: ArrayExpress, GEO
EST data: UniGene
RNA-Seq data: GEO

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Opisthokonta	16 genes ENSDARG00000002467 rdh14b ENSDARG00000008491 RDH13 (1 to many) ENSDARG00000010764 flj13639 ENSDARG00000011770 dhrs12 ENSDARG00000018069 rdh12 ENSDARG00000026322 dhrs13a.1 ENSDARG00000034577 RDH13 (1 to many) ENSDARG00000035579 si:dkey-174n20.1 ENSDARG00000039299 rdh14a ENSDARG00000045277 rdh12l ENSDARG00000054797 RDH13 (1 to many) ENSDARG00000058966 zgc:112332 ENSDARG00000068474 si:dkey-94e7.2 ENSDARG00000076970 si:ch211-165b10.3 ENSDARG00000089205 si:dkey-73n8.3 ENSDARG00000098746 dhrs13l1	Compare expression	[+]
Eukaryota	37 genes ENSDARG00000002467 rdh14b ENSDARG00000002523 hsdl2 ENSDARG00000008306 rdh5 ENSDARG00000008491 RDH13 (1 to many) ENSDARG00000010764 flj13639 ENSDARG00000011371 zgc:64106 ENSDARG00000011770 dhrs12 ENSDARG00000012016 hpgd ENSDARG00000012369 rdh10b ENSDARG00000015709 hsd17b12a ENSDARG00000016233 sdr16c5a ENSDARG00000017794 sdr16c5b ENSDARG00000017882 rdh1 ENSDARG00000018069 rdh12 ENSDARG00000019260 dhrs9 ENSDARG00000026236 zgc:56585 ENSDARG00000026322 dhrs13a.1 ENSDARG00000028862 rdh20 ENSDARG00000031336 hsd20b2 ENSDARG00000034577 RDH13 (1 to many) ENSDARG00000035579 si:dkey-174n20.1 ENSDARG00000035872 hsd17b12b ENSDARG00000038969 zgc:113142 ENSDARG00000039299 rdh14a ENSDARG00000041137 dhrs13a.3 ENSDARG00000041873 SDR16C5 (1 to many) ENSDARG00000043562 zgc:65997 ENSDARG00000044803 dhrs3b ENSDARG00000044982 dhrs3a ENSDARG00000045277 rdh12l ENSDARG00000054797 RDH13 (1 to many) ENSDARG00000058730 rdh10a ENSDARG00000058966 zgc:112332 ENSDARG00000068474 si:dkey-94e7.2 ENSDARG00000076970 si:ch211-165b10.3 ENSDARG00000089205 si:dkey-73n8.3 ENSDARG00000098746 dhrs13l1	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000031814.

Cross-references

Ensembl	ENSDARG00000031814 (dhrs13b)
ZFIN	ZDB-GENE-040801-253 (dhrs13b)
EMBL	BC078374, BC155169, CR457447
Uniprot/SPTREMBL	A9JT23, A9JT23_DANRE, E9QC89, E9QC89_DANRE, Q6DBT2, Q6DBT2_DANRE