Gene: tns3.2 - ENSDARG00000031911 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000031911
Name	tns3.2
Description	tensin 3, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-081031-95]
Organism	Danio rerio (zebrafish)
Synonym(s)	si:ch211-39i19.6
Paralog(s)	3 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0004734	gastrula	[+] 2 stages ZFS:0000022Gastrula:Bud ZFS:0000019Gastrula:Shield	1.87e3 1.87e3 2.37e3	93.74 93.74 92.08	AEIR AEIR AEIR
UBERON:0000922	embryo	[+] 5 stages UBERON:0000068embryo stage UBERON:0004707pharyngula stage ZFS:0000029Pharyngula:Prim-5 ZFS:0000033Hatching:Long-pec ZFS:0000037Larval:Day 5	2.02e3 2.02e3 3.08e3 3.52e3 4.61e3 8.12e3	93.25 93.25 89.69 88.23 84.56 72.80	AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000066fully formed stage	2.90e3 2.90e3	90.31 90.31	AEIR AEIR
UBERON:0002548	larva	[+] 2 stages UBERON:0000069larval stage ZFS:0000037Larval:Day 5	3.95e3 3.95e3 5.34e3	86.77 86.77 82.13	AEIR AEIR AEIR
UBERON:0001630	muscle organ	[+] 1 stage UBERON:0000066fully formed stage	3.98e3 3.98e3	86.67 86.67	AEIR AEIR
UBERON:0000948	heart	[+] 2 stages ZFS:0000036Larval:Day 4 UBERON:0000066fully formed stage	4.05e3 4.05e3 5.18e3	86.43 86.43 82.65	AEIR AEIR AEIR
UBERON:0000033	head	[+] 2 stages UBERON:0000066fully formed stage ZFS:0000037Larval:Day 5	4.53e3 4.53e3 1.36e4	84.83 84.83 54.52	AEIR AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	5.57e3 5.57e3	81.36 81.36	AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	5.83e3 5.83e3	80.50 80.50	AEIR AEIR
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	6.21e3 6.21e3	79.23 79.23	AEIR AEIR
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	6.65e3 6.65e3	77.74 77.74	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	7.10e3 7.10e3	76.22 76.22	AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000066fully formed stage	7.28e3 7.28e3	75.63 75.63	AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	7.41e3 7.41e3	75.18 75.18	AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	7.53e3 7.53e3	74.78 74.78	AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000066fully formed stage	8.14e3 8.14e3	72.74 72.74	AEIR AEIR
UBERON:0000970	eye	[+] 1 stage ZFS:0000031Pharyngula:Prim-25	8.74e3 8.74e3	70.73 70.73	AEIR AEIR
UBERON:0000307	blastula	[+] 2 stages ZFS:0000015Blastula:Dome ZFS:0000011Blastula:1k-cell	8.76e3 8.76e3 1.75e4	70.66 70.66 41.56	AEIR AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	8.86e3 8.86e3	70.34 70.34	AEIR AEIR
CL:0000094	granulocyte	[+] 1 stage UBERON:0000066fully formed stage	9.36e3 9.36e3	68.65 68.65	AEIR AEIR
UBERON:0000966	retina	[+] 1 stage ZFS:0000037Larval:Day 5	9.54e3 9.54e3	68.05 68.05	AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	9.66e3 9.66e3	67.65 67.65	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	1.06e4 1.06e4	64.50 64.50	AEIR AEIR
UBERON:0003982	mature ovarian follicle	[+] 1 stage UBERON:0000066fully formed stage	1.23e4 1.23e4	58.91 58.91	AEIR AEIR
UBERON:0019248	early embryo	[+] 1 stage UBERON:0000107cleavage stage	1.57e4 1.57e4	47.33 47.33	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Eumetazoa	3 genes ENSDARG00000020845 tns1b ENSDARG00000068397 tns2b ENSDARG00000076292 tns2a	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000031911.

Cross-references

Ensembl	ENSDARG00000031911 (tns3.2)
ZFIN	ZDB-GENE-081031-95 (tns3.2)
EMBL	CT583652, CU914153
Uniprot/SPTREMBL	B8JKC7, B8JKC7_DANRE, F1Q5F8, F1Q5F8_DANRE, F1QGK9, F1QGK9_DANRE, F1R6R9, F1R6R9_DANRE