D. rerio Gene: mxd1 - ENSDARG00000032039 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000032039
Namemxd1
DescriptionMAX dimerization protein 1 [Source:ZFIN;Acc:ZDB-GENE-060526-246]
OrganismDanio rerio (zebrafish)
Synonym(s)mad1, si:dkey-202n14.4

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
916
  • 916
96.94
  • 96.94
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
3.43e3
  • 3.43e3
88.50
  • 88.50
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
4.01e3
  • 4.01e3
  • 9.16e3
  • 1.02e4
  • 1.21e4
  • 1.46e4
86.59
  • 86.59
  • 69.33
  • 65.89
  • 59.57
  • 50.95
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
5.78e3
  • 5.78e3
80.63
  • 80.63
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
6.38e3
  • 6.38e3
78.63
  • 78.63
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
6.70e3
  • 6.70e3
77.57
  • 77.57
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
7.13e3
  • 7.13e3
  • 7.98e3
76.12
  • 76.12
  • 73.27
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
8.54e3
  • 8.54e3
71.41
  • 71.41
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
9.58e3
  • 9.58e3
67.93
  • 67.93
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
9.81e3
  • 9.81e3
67.16
  • 67.16
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
9.86e3
  • 9.86e3
67.00
  • 67.00
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.00e4
  • 1.00e4
  • 1.28e4
66.37
  • 66.37
  • 57.02
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.03e4
  • 1.03e4
  • 1.62e4
65.46
  • 65.46
  • 45.66
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.06
  • 65.06
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.34
  • 64.34
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.17e4
  • 1.17e4
  • 1.20e4
60.89
  • 60.89
  • 59.85
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.84
  • 57.84
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
53.54
  • 53.54
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.43e4
  • 1.43e4
52.28
  • 52.28
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.43e4
  • 1.43e4
52.16
  • 52.16
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.43e4
  • 1.43e4
51.96
  • 51.96
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.44e4
  • 1.44e4
51.68
  • 51.68
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.51e4
  • 1.51e4
49.38
  • 49.38
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.76e4
  • 1.76e4
41.07
  • 41.07
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLBX322550
EnsemblENSDARG00000032039 (mxd1)
Uniprot/SPTREMBLA2BFZ1, A2BFZ1_DANRE
ZFINZDB-GENE-060526-246 (mxd1)

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