D. rerio Gene: cnot7 - ENSDARG00000032116 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000032116
Namecnot7
DescriptionCCR4-NOT transcription complex, subunit 7 [Source:ZFIN;Acc:ZDB-GENE-061013-29]
OrganismDanio rerio (zebrafish)
Synonym(s)caf1, fd59c07, fj07d05, wu:fd59c07, wu:fj07d05, zgc:153168

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.64e3
  • 1.64e3
94.53
  • 94.53
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.38e3
  • 2.38e3
92.03
  • 92.03
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
5.36e3
  • 5.36e3
  • 1.06e4
  • 1.08e4
  • 1.24e4
  • 1.24e4
82.05
  • 82.05
  • 64.41
  • 63.77
  • 58.55
  • 58.37
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000037Larval:Day 5
6.97e3
  • 6.97e3
  • 1.38e4
  • 1.38e4
  • 1.47e4
  • 1.47e4
  • 1.48e4
  • 1.50e4
  • 1.50e4
  • 1.51e4
  • 1.52e4
  • 1.55e4
  • 1.55e4
  • 1.59e4
  • 1.61e4
  • 1.61e4
76.67
  • 76.67
  • 53.73
  • 53.66
  • 50.89
  • 50.86
  • 50.33
  • 49.92
  • 49.81
  • 49.56
  • 49.15
  • 48.22
  • 48.04
  • 46.61
  • 46.18
  • 46.11
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
7.37e3
  • 7.37e3
75.32
  • 75.32
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
8.28e3
  • 8.28e3
72.27
  • 72.27
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
8.48e3
  • 8.48e3
71.61
  • 71.61
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
8.48e3
  • 8.48e3
71.60
  • 71.60
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
9.12e3
  • 9.12e3
69.46
  • 69.46
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
9.89e3
  • 9.89e3
66.89
  • 66.89
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
1.03e4
  • 1.03e4
  • 1.19e4
  • 1.20e4
65.57
  • 65.57
  • 60.11
  • 59.75
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.41
  • 65.41
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.09e4
  • 1.09e4
  • 1.39e4
63.57
  • 63.57
  • 53.36
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.33
  • 62.33
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
1.14e4
  • 1.14e4
  • 1.21e4
  • 1.24e4
  • 1.34e4
  • 1.37e4
  • 1.38e4
61.81
  • 61.81
  • 59.55
  • 58.58
  • 55.21
  • 54.02
  • 53.89
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.06
  • 61.06
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0000068embryo stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000037Larval:Day 5
1.17e4
  • 1.17e4
  • 1.19e4
  • 1.28e4
  • 1.33e4
  • 1.34e4
  • 1.51e4
  • 1.53e4
  • 1.54e4
  • 1.65e4
60.76
  • 60.76
  • 60.03
  • 57.07
  • 55.41
  • 55.13
  • 49.38
  • 48.62
  • 48.45
  • 44.84
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.18e4
  • 1.18e4
60.61
  • 60.61
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.20e4
  • 1.20e4
59.86
  • 59.86
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.16
  • 59.16
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.30e4
  • 1.30e4
56.55
  • 56.55
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.36e4
  • 1.36e4
54.37
  • 54.37
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.40e4
  • 1.40e4
  • 1.41e4
53.24
  • 53.24
  • 52.81
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.43e4
  • 1.43e4
52.20
  • 52.20
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
1.44e4
  • 1.44e4
51.85
  • 51.85
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
1.46e4
  • 1.46e4
  • 1.50e4
  • 1.76e4
51.27
  • 51.27
  • 49.78
  • 41.01
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.47e4
  • 1.47e4
50.70
  • 50.70
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.94
  • 49.94
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.62e4
  • 1.62e4
45.84
  • 45.84
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.62e4
  • 1.62e4
45.71
  • 45.71
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLBC124650, CR384105
EnsemblENSDARG00000032116 (cnot7)
Uniprot/SPTREMBLE9QI08, E9QI08_DANRE
Uniprot/SWISSPROTCNOT7_DANRE, Q08BM8
ZFINZDB-GENE-061013-29 (cnot7)

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