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D. rerio Gene: cacng2a - ENSDARG00000032565 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000032565
Namecacng2a
Descriptioncalcium channel, voltage-dependent, gamma subunit 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1401]
OrganismDanio rerio (zebrafish)
Synonym(s)cacng2, zgc:64200
Orthologs(s)18 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
3.06e3
  • 3.06e3
89.76
  • 89.76
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
4.41e3
  • 4.41e3
  • 1.14e4
85.24
  • 85.24
  • 61.98
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
6.86e3
  • 6.86e3
  • 1.50e4
77.02
  • 77.02
  • 49.93
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
7.53e3
  • 7.53e3
  • 1.07e4
  • 1.62e4
  • 1.67e4
  • 1.74e4
74.79
  • 74.79
  • 64.24
  • 45.83
  • 43.92
  • 41.59
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.01e4
  • 1.01e4
  • 1.41e4
66.13
  • 66.13
  • 52.85
AEIR
  • AEIR
  • AEIR
UBERON:0001017central nervous system
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.03e4
  • 1.03e4
  • 1.07e4
  • 1.17e4
  • 1.20e4
  • 1.34e4
  • 1.41e4
  • 1.41e4
65.37
  • 65.37
  • 64.27
  • 60.70
  • 59.98
  • 55.24
  • 52.92
  • 52.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.55e4
  • 1.55e4
47.99
  • 47.99
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.66e4
  • 1.66e4
44.46
  • 44.46
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Euteleostomi1 geneCompare expression
Vertebrata2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000032565.

Cross-references

EnsemblENSDARG00000032565 (cacng2a)
ZFINZDB-GENE-040426-1401 (cacng2a)
EMBLBC057439, BX901883
Uniprot/SPTREMBLQ6PFS3, Q6PFS3_DANRE

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