D. rerio Gene: SCYL2 - ENSDARG00000032627 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000032627
NameSCYL2
Descriptionsi:ch211-244b2.1 [Source:ZFIN;Acc:ZDB-GENE-041210-205]
OrganismDanio rerio (zebrafish)
Synonym(s)cvak104, kiaa1360

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
3.21e3
  • 3.21e3
89.24
  • 89.24
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
3.91e3
  • 3.91e3
86.90
  • 86.90
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
4.44e3
  • 4.44e3
  • 4.78e3
85.13
  • 85.13
  • 84.00
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
6.07e3
  • 6.07e3
  • 7.27e3
79.68
  • 79.68
  • 75.66
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
7.02e3
  • 7.02e3
76.50
  • 76.50
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
7.13e3
  • 7.13e3
76.14
  • 76.14
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
7.16e3
  • 7.16e3
76.03
  • 76.03
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
7.56e3
  • 7.56e3
74.67
  • 74.67
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
7.62e3
  • 7.62e3
74.47
  • 74.47
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
7.74e3
  • 7.74e3
  • 1.01e4
74.08
  • 74.08
  • 66.27
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
7.84e3
  • 7.84e3
73.74
  • 73.74
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
8.14e3
  • 8.14e3
72.75
  • 72.75
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
8.22e3
  • 8.22e3
  • 1.08e4
72.47
  • 72.47
  • 63.78
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.71e3
  • 8.71e3
70.85
  • 70.85
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
9.32e3
  • 9.32e3
68.79
  • 68.79
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.41e3
  • 9.41e3
68.48
  • 68.48
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
9.84e3
  • 9.84e3
67.04
  • 67.04
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
9.87e3
  • 9.87e3
  • 1.00e4
  • 1.03e4
  • 1.10e4
  • 1.14e4
66.96
  • 66.96
  • 66.44
  • 65.55
  • 63.18
  • 61.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.94
  • 63.94
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.08e4
  • 1.08e4
63.85
  • 63.85
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
61.39
  • 61.39
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.18e4
  • 1.18e4
  • 1.19e4
60.60
  • 60.60
  • 60.30
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.25
  • 60.25
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
58.18
  • 58.18
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLCR749747, CR936411
EnsemblENSDARG00000032627 (SCYL2)
HGNCHGNC:19286 (SCYL2)
Uniprot/SPTREMBLQ1L881, Q1L881_DANRE
ZFINZDB-GENE-041210-205 (si:ch211-244b2.1)

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