D. rerio Gene: si:dkey-261m9.12 - ENSDARG00000032637 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000032637
Namesi:dkey-261m9.12
Descriptionsi:dkey-261m9.12 [Source:ZFIN;Acc:ZDB-GENE-131126-58]
OrganismDanio rerio (zebrafish)
Orthologs(s)77 orthologs
Paralog(s)439 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
876
  • 876
97.07
  • 97.07
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
1.11e4
  • 1.11e4
  • 1.27e4
62.86
  • 62.86
  • 57.56
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
1.12e4
  • 1.12e4
  • 1.77e4
62.62
  • 62.62
  • 40.89
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
55.26
  • 55.26
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.52e4
  • 1.52e4
  • 2.11e4
49.13
  • 49.13
  • 29.47
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
1.63e4
  • 1.63e4
45.38
  • 45.38
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.66
  • 40.66
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
1.81e4
  • 1.81e4
  • 1.84e4
  • 1.86e4
  • 2.29e4
39.27
  • 39.27
  • 38.33
  • 37.88
  • 23.37
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
2.15e4
  • 2.15e4
28.16
  • 28.16
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.18e4
  • 2.18e4
27.10
  • 27.10
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi19 species77 genesCompare expression

Orthology information comes from OMA : ENSDARG00000032637.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Otophysi16 genesCompare expression
Eukaryota439 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000032637.

Cross-references

EnsemblENSDARG00000032637 (si:dkey-261m9.12)
ZFINZDB-GENE-131126-58 (si:dkey-261m9.12)
EMBLCR762436
Uniprot/SPTREMBLE7F5A4, E7F5A4_DANRE

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